Gene Information

Name : hpaR (SeAg_B1059)
Accession : YP_002145969.1
Strain : Salmonella enterica SL483
Genome accession: NC_011149
Putative virulence/resistance : Resistance
Product : homoprotocatechuate degradation operon regulator, HpaR
Function : -
COG functional category : K : Transcription
COG ID : COG1846
EC number : -
Position : 1057496 - 1057936 bp
Length : 441 bp
Strand : -
Note : identified by match to protein family HMM PF01047; match to protein family HMM TIGR02337

DNA sequence :
ATGCATGATTCATTAACCATCGCCTTGCTTCAGGCGCGCGAAGCGGCAATGACCTATTTCCGCCCCATCGTTAAAAGCCA
CAATCTGACCGACCAGCAATGGCGCATTGTGCGAATCCTGGCCGATAGCCCCTCTATGGATTTTCACGAGCTGGCCTTTC
GTACCTGTATTTTGCGTCCAAGTCTGACCGGAATATTGACGCGCATGGAGCGAGACGGACTGGTGTTGCGACTCAAGCCG
GTTAACGATCAGCGTAAGTTATATGTCATGTTGACGGAGCAGGGACAAACGTTGTACGCCCGTGCCCGAAGCCAGGTAGA
AGAGGCTTATCGAAAAATTGAGGCCGATTTCACGCCCGAAAAAACACAGCAATTGATGCTGCTGCTGGACGATCTTATTG
CTCTGGGACGCCAGCATCCTGATAGCGAAGCGGAAGCATAG

Protein sequence :
MHDSLTIALLQAREAAMTYFRPIVKSHNLTDQQWRIVRILADSPSMDFHELAFRTCILRPSLTGILTRMERDGLVLRLKP
VNDQRKLYVMLTEQGQTLYARARSQVEEAYRKIEADFTPEKTQQLMLLLDDLIALGRQHPDSEAEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpcR AAO17176.1 HpcR Not tested tcd island Protein 3e-43 72

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hpaR YP_002145969.1 homoprotocatechuate degradation operon regulator, HpaR BAC0505 Protein 4e-33 56