Gene Information

Name : SeAg_B1049 (SeAg_B1049)
Accession : YP_002145959.1
Strain : Salmonella enterica SL483
Genome accession: NC_011149
Putative virulence/resistance : Virulence
Product : chaperone protein SigE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1047863 - 1048204 bp
Length : 342 bp
Strand : -
Note : identified by match to protein family HMM PF07824

DNA sequence :
ATGGAAAGTCTATTAAATCGTTTATATGCCGCGTTAGGCCTGGATGCGCCAGAAGATGAGCCACTTCTCATCATTGATGA
TGGGATACAGGTTTATTTTAATGAATCCGATCATACACTGGAAATGTGCTGTCCCTTTATGCCATTGCCTGACGACACTC
TGACTTTGCAGCATTTTTTACGTCTTAACTACGCCAGCGCCGTCACTATCGGCGCTGACGCAGACAATACTGCTTTAGTG
GCGCTTTATCGCTTGCCGCAAACCAGTACCGAAGAAGAGGCGCTCACTGGTTTTGAATTATTCATTTCTAACGTGAAGCA
ATTGAAAGAGCGTTATGCATAA

Protein sequence :
MESLLNRLYAALGLDAPEDEPLLIIDDGIQVYFNESDHTLEMCCPFMPLPDDTLTLQHFLRLNYASAVTIGADADNTALV
ALYRLPQTSTEEEALTGFELFISNVKQLKERYA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sigE NP_455587.1 cell invasion protein Virulence SPI-5 Protein 2e-46 99
pipC AAC33724.1 PipC Virulence SPI-5 Protein 1e-46 99
pipC YP_216029.1 hypothetical protein Virulence SPI-5 Protein 4e-46 97
pipC NP_460063.1 pathogenicity island-encoded protein C Virulence SPI-5 Protein 4e-46 97
sigE AAS66828.1 SigE Not tested SSR-1 Protein 1e-20 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeAg_B1049 YP_002145959.1 chaperone protein SigE VFG0591 Protein 1e-46 97