Gene Information

Name : SeAg_B1047 (SeAg_B1047)
Accession : YP_002145957.1
Strain : Salmonella enterica SL483
Genome accession: NC_011149
Putative virulence/resistance : Virulence
Product : secreted effector protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1357
EC number : -
Position : 1046005 - 1046880 bp
Length : 876 bp
Strand : -
Note : identified by match to protein family HMM PF00805

DNA sequence : 
ATGACAATAACTAACGCGTCCCCAGAAAATATATTAAGATATTTGCATGCGGCCGGTACCGGTACGAAAGAAGCAATGAA
AAGTGCAACTTCACCACGCGGTGTACTGGAGTGGCTTGTCAATTTTTTTACCTGTGGTGGAGTAAGAAGAAGCAATGAAA
GATGCTTTCGGGAGGTAATTGGAAAACTGACCACATCATTATTATATGTAAATAAAGATGCTTTCTTCGATGGTAATAAA
ATATTTCTGGAGGATGTCAACGGGTGTACTATATGTCTGTCATGTGGAGCAGCATCCGAAAATACGGATCCCATGGTCAT
TATTGAAGTGAACAAAAATGGAAAAACTGTAACGGATAACGTTGATAGTGAGAGATTTTGGAATGTATGTCGAATGTTAA
AACTGATGAGTAAACATAACATACAACAGCCTGATTCACTTATAACCGAGGATGGTTTTCTGAACCTGCGCGGAGTAAAC
CTGGCTCATAAAGATTTCCAGGGGGAAGATTTGTCAGAAATAGATGCTTCTGATGCAGATTTCCGTGAAACAACTCTTTC
TAATGTAAATTTAGTCGGTGCAAATTTGTGTTGTGCAAATCTACACGCTGTAAATCTAATGGGTTCAAACATGACTAAAG
CAAACCTGACTCACGCAAACCTGACTTGCGCTAACATGTCCGTTGTAAACTTAACCGCTGCAATTCTATTCGGCTCAGAC
TTAACTGACACCAAACTAAATGGTGCGAAATTAGATAAGATAGCTCTAACTTTAGCGAAAGCATTAACAGGAGCCGATCT
GACAGGTAGTCAACATACCCCTACTCCACTCCCGGATTACAATGATAGAACTCTTTTCCCCCATCCGATATTTTAG

Protein sequence : 
MTITNASPENILRYLHAAGTGTKEAMKSATSPRGVLEWLVNFFTCGGVRRSNERCFREVIGKLTTSLLYVNKDAFFDGNK
IFLEDVNGCTICLSCGAASENTDPMVIIEVNKNGKTVTDNVDSERFWNVCRMLKLMSKHNIQQPDSLITEDGFLNLRGVN
LAHKDFQGEDLSEIDASDADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHANLTCANMSVVNLTAAILFGSD
LTDTKLNGAKLDKIALTLAKALTGADLTGSQHTPTPLPDYNDRTLFPHPIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pipB NP_460061.1 secreted effector protein Virulence SPI-5 Protein 8e-128 97
pipB YP_216027.1 pathogenicity island encoded protein: SPI3 Virulence SPI-5 Protein 4e-128 97
pipB AAC33725.1 PipB Virulence SPI-5 Protein 2e-128 97
pipB NP_455586.1 conserved hypothetical protein Virulence SPI-5 Protein 1e-128 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeAg_B1047 YP_002145957.1 secreted effector protein VFG0589 Protein 3e-128 97