Gene Information

Name : SSPA0673 (SSPA0673)
Accession : YP_002141516.1
Strain : Salmonella enterica AKU12601
Genome accession: NC_011147
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 798041 - 798457 bp
Length : 417 bp
Strand : +
Note : similar to Salmonella typhi CT18 conserved hypothetical protein

DNA sequence :
ATGTATTCAAGAGCCGATCGCTTATTAAGACAGTTTTCACTGAAATTAAATGCCGATTCAATTGCCTTTGACGAAAACAG
ATTATGCTCATTTATTATAGATAACCGTTACCGTATCTTACTAACAAGCACTAACAGTGAGTATATAATGATATACGGTT
TTTGCGGAAGACCTCCGGATAATAATAATCTTGCTTTTGAATTTCTCAATTCTAATTTATGGTTTGCAGAGAATAATGGA
CCACATTTGTGTTATGATAATAACTCACAATCATTATTACTGGCTCTAAATTTCTCACTCAATGAAAGTTCTGTAGAGAA
ACTTGAATGTGAAATTGAGGTGGTTATTAGATCAATGGAGAATCTGTATCACATTTTACAGGATAAAGGAATAAATCTGG
ATACCGATTATACGTGA

Protein sequence :
MYSRADRLLRQFSLKLNADSIAFDENRLCSFIIDNRYRILLTSTNSEYIMIYGFCGRPPDNNNLAFEFLNSNLWFAENNG
PHLCYDNNSQSLLLALNFSLNESSVEKLECEIEVVIRSMENLYHILQDKGINLDTDYT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cesT AFO66323.1 putative chaperone Not tested SESS LEE Protein 2e-34 58
cesT AFO66393.1 putative chaperone Not tested SESS LEE Protein 2e-34 58
cesT AAK26723.1 CesT Virulence LEE Protein 3e-36 58
cesT YP_003223467.1 chaperone CesT Not tested LEE Protein 5e-36 58
cesT AAL57550.1 CesT Virulence LEE Protein 3e-36 58
cesT YP_003232161.1 T3SS chaperone CesT Virulence LEE Protein 5e-36 58
cesT CAC81870.1 CesT protein Virulence LEE II Protein 3e-36 58
cesT CAI43866.1 CesT protein Virulence LEE Protein 3e-36 58
Z5111 NP_290260.1 hypothetical protein Not tested LEE Protein 3e-36 58
orfU AAC38391.1 OrfU Not tested LEE Protein 2e-36 58
ECs4560 NP_312587.1 protein CesT Virulence LEE Protein 3e-36 58
unnamed AAC31505.1 L0026 Not tested LEE Protein 2e-36 58
unnamed ACU09450.1 putative factor Tir chaperone Virulence LEE Protein 2e-36 58
cesT YP_003236080.1 putative chaperone CesT Not tested LEE Protein 4e-36 57
unnamed AAL06377.1 CesT Virulence LEE Protein 5e-36 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSPA0673 YP_002141516.1 hypothetical protein VFG0804 Protein 9e-37 58
SSPA0673 YP_002141516.1 hypothetical protein VFG0738 Protein 1e-36 58