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Name : deoA (SSPA4067) Accession : YP_002144901.1 Strain : Salmonella enterica AKU12601 Genome accession: NC_011147 Putative virulence/resistance : Unknown Product : thymidine phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : - Position : 4551474 - 4552796 bp Length : 1323 bp Strand : + Note : 'Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate' DNA sequence : GTGTTTCTCGCACAAGAAATTATTCGTAAAAAGCGTGATGGTCATGCGTTGAGTGACGAAGAAATTCGTTTCTTTATCAA TGGTATTCGTGACAATACTATCTCTGAAGGGCAGATTGCCGCCCTGGCGATGACCATCTTCTTCCACGATATGACCATGC CGGAGCGTGTTTCGCTGACCATGGCGATGCGGGATTCCGGTACTGTCCTTGACTGGAAAAGCCTGAATCTCAATGGCCCG ATTGTCGATAAGCATTCGACCGGCGGCGTAGGGGACGTGACGTCTCTGATGCTGGGGCCAATGGTAGCGGCCTGCGGCGG TTATGTGCCGATGATCTCCGGTCGCGGTCTCGGACATACCGGCGGTACGCTCGACAAACTGGAAGCGATCCCGGGCTTTG ATATCTTCCCGGACGACAACCGTTTCCGCGAAATTATTCAAGACGTGGGTGTGGCGATTATTGGGCAAACCAGCTCGCTT GCACCGGCGGACAAACGTTTTTACGCCACCCGCGATATTACCGCGACGGTGGACTCTATTCCGCTGATCACCGGTTCCAT CCTCGCCAAGAAACTGGCCGAAGGGCTGGATGCGCTGGTAATGGACGTAAAAGTCGGCAGCGGCGCGTTTATGCCAACCT ATGAACTTTCTGAAGCCCTTGCTGAAGCGATTGTTGGCGTGGCAAACGGCGCGGGAGTTCGCACTACGGCGTTGTTAACC GATATGAACCAGGTGCTGGCTTCGAGCGCCGGTAACGCGGTGGAAGTGCGTGAAGCCGTGCAGTTCCTGACCGGTGAATA CCGCAATCCGCGCTTGTTTGACGTCACCATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAATCTGGCAAAAGATGACG CCGAAGCGCGTGCCAAACTGCAGGCGGTGCTGGATAACGGTAAAGCGGCAGAAGTCTTTGGCCGGATGGTGGCCGCGCAG AAAGGGCCGAGCGATTTCGTTGAGAACTACGATAAATACCTGCCGACCGCCATGTTGAGCAAAGCGGTATATGCTGATAC CGAAGGGTTTATCAGCGCAATGGATACGCGTGCGCTGGGGATGGCGGTCGTCTCGATGGGCGGCGGCCGTCGTCAGGCGT CTGATACCATTGATTACAGCGTTGGCTTTACCGACATGGCCCGTCTGGGCGACAGCATCGACGGGCAGCGCCCGCTGGCG GTGATTCATGCCAAAGACGAAGCCAGTTGGCAGGAAGCGGCGAAGGCCGTCAAAGCGGCAATTATCCTTGACGATAAAGC GCCAGCAAGCACACCTTCGGTCTATCGTCGAATTACTGAATAG Protein sequence : MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRDSGTVLDWKSLNLNGP IVDKHSTGGVGDVTSLMLGPMVAACGGYVPMISGRGLGHTGGTLDKLEAIPGFDIFPDDNRFREIIQDVGVAIIGQTSSL APADKRFYATRDITATVDSIPLITGSILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAIVGVANGAGVRTTALLT DMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVTMALCVEMLISGNLAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQ KGPSDFVENYDKYLPTAMLSKAVYADTEGFISAMDTRALGMAVVSMGGGRRQASDTIDYSVGFTDMARLGDSIDGQRPLA VIHAKDEASWQEAAKAVKAAIILDDKAPASTPSVYRRITE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 2e-69 | 42 |
