|
Name : SSPA0038 (SSPA0038) Accession : YP_002140886.1 Strain : Salmonella enterica AKU12601 Genome accession: NC_011147 Putative virulence/resistance : Unknown Product : glycosyl hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1501 EC number : - Position : 48402 - 50432 bp Length : 2031 bp Strand : - Note : similar to Salmonella typhi CT18 glycosyl hydrolase DNA sequence : ATGGGAGGCACCACCATGCCATTTATGCAACAAGACCCACGTCGTCTGGTCTGGCAGCAAAACGATCGCTATTTATGGAT TGAACCCTGGGGCGAGAACAGCCTGCGCGTACGCAGTGGCCGTCATCTGCCGGTAATGAGAAATGAAGACTGGGCATTGA CTGAGCCAGTCGCAGAAAGCCAGTGCCACATTGATTATGAGCATCACCAGGCAACGCTGACCAACGGCAAAATTATCGCT ATCGTCAATCAAAAAGGACAAGTTACCTTTTACCGCCATCCACACAAACCCCTGTTGCAGGAGTTTTGGCGCCTGCGGGG CGAAATTGGCGAGGATGAATCATCTCACGGCCAGTACGTCAGCGCACTCAACCTTGAGGGACGCGAGTTCCGCCCGATTC AGGGTGGGAAATATTCACTGAAAGCCCGCTTCGAAGCCACCGAAGGGGAAAAAATTTATGGCATGGGGCAGTATCAACAG GCCAACCTGGATCTCAAAGGATGCGTGCTTGAGCTAGCGCAACGTAACTCCCAGGCCTCAGTACCATTTATGCTCTCCAG TCTGGGCTACGGATTTTTATGGAACAACCCGGCAGTCGGACGCGTAACCTTTGCCCAAAACGTTACCGAATGGGAAGCGC AGGTCAGCGAACAGTTAGACTACTGGATCACGGCTGGCGATACCCCGGCAGAAATTAGCCGGGCTTACGCGCTGGCTACC GGCACGCCGCCGATGATGCCGGACTACGCCATGGGCTTCTGGCAGTGCAAACTCCGTTATCGTACGCAGGAAGAGCTGCT GGAGGTCGCCCGCGAATATAAGCGCCGCAATCTACCTATCTCGGTGATCGTTATCGACTTCTTTCACTGGCCGAATCAGG GTGACTGGATGTTCGATGCGCGCGACTGGCCCGATCCTGATGCCATGATTGCCGAGCTGAAATCGCTGGGAATTGAGCTG ATGGTCTCCGTCTGGCCGACGGTGGATAACCGTACCGAAAGCTATCGGGAGATGCGTGAAAACGGCTGGCTGGTACAAAC GGAACGTGGCTTGCCGATCAATATGGATTTCCTCGGCAATACCACTTACTTTGATGCGACTCATCCGGGCGCGCGCGACT ATGTCTGGGGCAAAGCCAAACGCAACTATTACGATAAAGGCGTGAAGCTATTCTGGTTAGATGAAGCCGAACCTGAGTTC AGCGTTTACGACTACGACAACTATCGCTACCATGCCGGACCGGTACTGGAAGTGGGCAATATCTACCCACGCATGTACGC TAAAACCTTTTTTGATGGCATGAAAGCCGATGGCGAAGACCAGGTTATCAACCTGCTACGCTGCGCCTGGGCCGGCAGTC AGAAGTACGGCGCTCTGGTCTGGTCAGGGGATATTCACTCCTCGTTTAGATCGCTGCGCAACCAGTTTGCCGCCGGACTC AATATGGGAATAGCAGGGATACCGTGGTGGACGACGGATATCGGCGGTTTCCATGGCGGTAATATTCACGACCCGAAATT CCATGAATTGCTGATTCGCTGGTTCCAGTGGGGCGTCTTTAGTCCGGTGATGCGTCTGCACGGCAACCGCGATCCGCAAA TTTTACCCGCGCAACCGTATCGGGATGGTATCGCCCAGTGCCCTACAGGTGCGCCGAACGAGGTCTGGAGCTACGGTGAG GAAGTATGCGACGTACTGACAGGTTGCCTGGCGTTGCGAGAAAAACTCAAGCCCTATATCAAAGCGCTGATGGAGGAAAC CCATAAGCACAATACGCCAGTGATGCGCCCCCTGTTCTTTGAATTCCCCGAACAGGAAACAAGTTGGACAATCACCGACC AGTACTGTTTTGGTCCTGACCTGCTGATCGCCCCCGTCATGCATGAAGGTATGCGCGAACGTGATGTCTGGCTACCAGAA GGGGAAACATGGACGGATCTTGCGACCGGTAAAAGCTATTCAGGAGGGCAGACGCTGCATTACGCTACGCCACTGAACAG AATTCCGGTGTTTATCCGCGAAGGTGGGTAG Protein sequence : MGGTTMPFMQQDPRRLVWQQNDRYLWIEPWGENSLRVRSGRHLPVMRNEDWALTEPVAESQCHIDYEHHQATLTNGKIIA IVNQKGQVTFYRHPHKPLLQEFWRLRGEIGEDESSHGQYVSALNLEGREFRPIQGGKYSLKARFEATEGEKIYGMGQYQQ ANLDLKGCVLELAQRNSQASVPFMLSSLGYGFLWNNPAVGRVTFAQNVTEWEAQVSEQLDYWITAGDTPAEISRAYALAT GTPPMMPDYAMGFWQCKLRYRTQEELLEVAREYKRRNLPISVIVIDFFHWPNQGDWMFDARDWPDPDAMIAELKSLGIEL MVSVWPTVDNRTESYREMRENGWLVQTERGLPINMDFLGNTTYFDATHPGARDYVWGKAKRNYYDKGVKLFWLDEAEPEF SVYDYDNYRYHAGPVLEVGNIYPRMYAKTFFDGMKADGEDQVINLLRCAWAGSQKYGALVWSGDIHSSFRSLRNQFAAGL NMGIAGIPWWTTDIGGFHGGNIHDPKFHELLIRWFQWGVFSPVMRLHGNRDPQILPAQPYRDGIAQCPTGAPNEVWSYGE EVCDVLTGCLALREKLKPYIKALMEETHKHNTPVMRPLFFEFPEQETSWTITDQYCFGPDLLIAPVMHEGMRERDVWLPE GETWTDLATGKSYSGGQTLHYATPLNRIPVFIREGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0551 | NP_814321.1 | glycosyl hydrolase | Not tested | Not named | Protein | 2e-156 | 46 |
| ef0077 | AAM75281.1 | EF0077 | Not tested | Not named | Protein | 2e-156 | 46 |
