Gene Information

Name : SSPA3789 (SSPA3789)
Accession : YP_002144627.1
Strain : Salmonella enterica AKU12601
Genome accession: NC_011147
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4943
EC number : -
Position : 4250016 - 4251593 bp
Length : 1578 bp
Strand : +
Note : similar to Salmonella typhi CT18 exported protein

DNA sequence :
GTGTTGAGATTTCTCGGAACGATCATTGTGGTGTTACTTCCTGTATTGCTGGCGATCTGGTTTGCTCATATCCGGGCAGT
CTCTGAAACCAGAAATCAGTTACATTCATTTGCGCAGTTGGTATTAGATAAAACGGAGCGGGTTATCCTGCAAGCAGATT
TAGCCCGCGATGCCGCTGAACAATATCAGGGGCAAGCCTGTACGCCAGCCCATCAACAGCGAATGCTGAATATTATCCGC
GGTCGTTTGTACATTAATGAGTTGATTTATGCGAAGGGCCAGCGTTTTCTATGCTCTACGGTTATGACGCCAACAAGTCC
TTATTTTATTCCCCGCGCTGACTATAAACGAAAGCCTGACATCGCTATTTATTACTATCGTGATACGCCTTTTTTCAACG
GTTATAAAATGACATATATGCAGCGGGGAAACTATGTCGCGGTTATCAATCCCTTATCTTATAGCGAGGTGATGTCAGAC
GATCCGGCGTTGGCCTGGGGAATGTATGATACGGTGACCAACACCTTTTTCTCCCTGAGTGAACAGGCGCAGGCTGATCA
GCTATTACCTTTGGTACGACGGAGTGAACCTGTGTTCCAACAGGGTGAGCGTTTTTATACTCTGGTTAAATCAGCAAAAC
GACCGGTTGCCGCGATTGTGTCAACCTCAAAGCAACGCTTTTACCAGAACCTCTTTCATCAGCTTACGTTAACGCTACCG
TTAGGGATCATCTGTAGCATTATCGTCTTATTTATGTGGTCACGATCCCGGCAGGCATATTACTCACCGCGTCGATTGCT
GCAACGGGCCATTACTAGGCACCAGCTTTGCCTTCATTATCAGCCGATCATTGATATCCGAAACGGGACATGTGTAGGTG
CCGAAGCGCTATTGCGTTGGCCGGGCTATCACGGTCCGGTGATGAGCCCGTGCGAATTTATTCCGCTGGCGGAAAAAGAG
GGGATGATTGAGCAGATCACCGATTATGTCGTCGAAGAGGTATTTAATGATTTAGGTGGTTTTCTGGCCGCGCACCCGCA
TCTTTATGTCTCTATCAATCTCTCTGCCGCCGATTTTCTCTCTTCCCGACTAATTGTGATGATTCATGAAAAAACGCGTC
AGCATTCAGTGCTTGCGCAACAGATAAAGGTTGAAGTGACTGAGCGCGGATTTATTGATGTGCCTAAAATGACGCCGATT
ATTCAGGCGTTTCGCCAGGCGGGATACGAGGTGGCAATTGATGACTTTGGTACCGGCTATTCGAACTTGCATAACCTGTA
CTCATTAAATGTCGACCTTTTAAAAATTGATAAATCTTTTGTCGACACGCTAACCACTAATAGCGCCAGCCATTTGATTG
TGGAACATATTATTGAAATGGCGCAAAGTTTGCGGCTAAAAATCATTGCTGAGGGGGTTGAAACGGCTGAACAGGTTAGC
TGGTTGCTAAAACGCGGCGTTCAATATTGTCAGGGATGGCACTTTGCGAAGGCGTTGCCACCGCAGGAATTCATCGCCTG
GTTACAACAAACGCCCGCGCCTCTGACGATACGCGGGCAGACGCCCTACAGGCGGTGA

Protein sequence :
MLRFLGTIIVVLLPVLLAIWFAHIRAVSETRNQLHSFAQLVLDKTERVILQADLARDAAEQYQGQACTPAHQQRMLNIIR
GRLYINELIYAKGQRFLCSTVMTPTSPYFIPRADYKRKPDIAIYYYRDTPFFNGYKMTYMQRGNYVAVINPLSYSEVMSD
DPALAWGMYDTVTNTFFSLSEQAQADQLLPLVRRSEPVFQQGERFYTLVKSAKRPVAAIVSTSKQRFYQNLFHQLTLTLP
LGIICSIIVLFMWSRSRQAYYSPRRLLQRAITRHQLCLHYQPIIDIRNGTCVGAEALLRWPGYHGPVMSPCEFIPLAEKE
GMIEQITDYVVEEVFNDLGGFLAAHPHLYVSINLSAADFLSSRLIVMIHEKTRQHSVLAQQIKVEVTERGFIDVPKMTPI
IQAFRQAGYEVAIDDFGTGYSNLHNLYSLNVDLLKIDKSFVDTLTTNSASHLIVEHIIEMAQSLRLKIIAEGVETAEQVS
WLLKRGVQYCQGWHFAKALPPQEFIAWLQQTPAPLTIRGQTPYRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yjcC YP_219130.1 diguanylate cyclase/phosphodiesterase Not tested SPI-4 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSPA3789 YP_002144627.1 hypothetical protein VFG0584 Protein 0.0 99