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Name : SSPA3784 (SSPA3784) Accession : YP_002144622.1 Strain : Salmonella enterica AKU12601 Genome accession: NC_011147 Putative virulence/resistance : Virulence Product : type-I secretion protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1538 EC number : - Position : 4230471 - 4231790 bp Length : 1320 bp Strand : + Note : similar to Salmonella typhi CT18 type-I secretion protein DNA sequence : ATGAAGATTAAGATGTTTTTTCTGACGACTGCTTTTATTACACAAAGCACATACGCCAGCGAGCTTCCGGTCATTCCTCT AAGAGATTTAGTTAATGCCGCATTAACGCATCAGCCCTCTGTTGCTGTTTCATATTATGAGACTGAAAAGAAAAACAGTG ACTTAGATCTTTCACGGGCAGCACTTTATCCTACCCTGGATCTAACATCTGGCCTTAATAATAACAGAAAGGAGTCGTCA GGTACCGAGAGAAACGTTGAAAATAAGGTGTCCTTATCATACCGAATAACGGATTTTGGAGTGAGGGGGGCTAATATCAG GAAATCTGAATATGAAAGAGATAATAGTAAAACTGACTATGAAAAAACAAAGAATATAGTGTCTCAGGAGGTTGTGACAA CCTATTACAACATCAGTAAATATCGTGAAATGATTGATGGCGTAAATCTGGAGAAAGAGTTTTATAAAAAGATGCTGGAA ACTTTTTCGCTGCTGGTATCTTCCGGTGTAGCTATGCAATCTGATATGCGTAAAGTACAAGTATCTATCGATGCATTAAA TACCAGAAGCATTATGTATCAGTCGATGTTAGATGATGAAATGTATAAAATGCAGAATATGACTGGTCTGAATTTGTCAC CAGATCAGATTCAAAGCGATGAAAAATTCAACCTCTTCAAAAAATATATCTTTGTCGAAAGTCCTGAAAAACTTATGGAC ATGGTGATGAAATACAACGATGACTATAAGATGCTTGTCAATACCCGAAAAGCCGCGACCGAAGATATTAATGCCGCAAA ATCATCCTATTTTCCGACTGTAGATCTCGTGTCCAGCTATGTACAGAATAATCCGAGCGGTAGTGCCAAAAAAAGTGATT ATGAAGATGAATTTAAAACAGGTATCAATGTCAGTTTCAACATTTTTAATGGGTTCAGAAATTCAGCCCAGGAAAGAAAA ATGGTGGCAAGTTACTCGCAGGCTAAGCTGCAAATTGACGATTTTTTGATTAAAACGCGTTATAACATTGATTCACAACT TTCAAGATACGCCGCTGCAAAAGAGACTTACTCAGTGGCGGAACGTTCACATACAAACGCGTTACAGCTTACTGAATTAT ATGAGCAGGAGTTTCAGTTAGGGCAAAAAAGTTTGCTTGATTTAATTTCAAGCCGTAATGAAGCATTTCAGGCATATGTA AGCATGATCGACAGCAAATATAGCCTGTATATTTTAAAGTTACAGCAACTCTCATTGATTTTTCATTTAATGGATTATTT AAAAGGAAATACTGAAAGTGAGTTAAATGTAATGAAATGA Protein sequence : MKIKMFFLTTAFITQSTYASELPVIPLRDLVNAALTHQPSVAVSYYETEKKNSDLDLSRAALYPTLDLTSGLNNNRKESS GTERNVENKVSLSYRITDFGVRGANIRKSEYERDNSKTDYEKTKNIVSQEVVTTYYNISKYREMIDGVNLEKEFYKKMLE TFSLLVSSGVAMQSDMRKVQVSIDALNTRSIMYQSMLDDEMYKMQNMTGLNLSPDQIQSDEKFNLFKKYIFVESPEKLMD MVMKYNDDYKMLVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKKSDYEDEFKTGINVSFNIFNGFRNSAQERK MVASYSQAKLQIDDFLIKTRYNIDSQLSRYAAAKETYSVAERSHTNALQLTELYEQEFQLGQKSLLDLISSRNEAFQAYV SMIDSKYSLYILKLQQLSLIFHLMDYLKGNTESELNVMK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4456 | NP_458556.1 | putative type-I secretion protein | Not tested | SPI-4 | Protein | 0.0 | 99 |
| SC4138 | YP_219125.1 | ABC transporter outer membrane protein | Not tested | SPI-4 | Protein | 0.0 | 99 |
| STM4259 | NP_463124.1 | ABC exporter outer membrane component | Not tested | SPI-4 | Protein | 0.0 | 99 |
| spi4_C | AAC26641.1 | ABC exporter outer membrane component homolog | Virulence | SPI-4 | Protein | 0.0 | 99 |
| siiC | CAE11795.1 | putative type-I secretion protein, putative outer membrane component | Virulence | SPI-4 | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SSPA3784 | YP_002144622.1 | type-I secretion protein | VFG0579 | Protein | 0.0 | 99 |
