|
Name : SSPA3716 (SSPA3716) Accession : YP_002144554.1 Strain : Salmonella enterica AKU12601 Genome accession: NC_011147 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 4148484 - 4150379 bp Length : 1896 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGTCTACAACAACGTTAACCCGCCGCGAGCAGCGCGCTAAAGCCCAGCATTTTATCGATACGCTGGAAGGGACTGCCTT TCCCAACTCGAAACGCATCTACGTGACCGGTTCGCAGCATGATATTCGCGTACCGATGCGCGAAATTCAACTTAGCCCGA CGCTCATCGGCGGCAGTAAAGACAACCCGCAGTTTGAAGAGAACGAAGCCGTACCGGTATACGACACCTCCGGCCCCTAT GGCGATCCTGAGGTGGCGATTAACGTCCAGCAGGGTCTGGCGAAACTGCGCCAGCCGTGGATTGATGCACGCAACGATAG CGAAGAATTAGACGACCGTAGCTCGGCTTATACCAGAGAACGTCTGGCCGACGATGGCCTGGACGATCTGCGTTTTACCG GCCTGCTGACGCCAAAACGCGCCAAAGCCGGACATCGCGTGACGCAACTTCATTATGCCCGCCAGGGGATCGTCACTCCC GAAATGGAGTTCATCGCCATCCGTGAAAACATGGGCCGCGAGCGCATTCGTAGTGAAGTGCTGCGCCACCAGCATCCGGG CATGAACTTTGGCGCGCGCCTGCCGGAAAACATCACCCCGGAATTCGTGCGTGATGAAGTCGCCGCGGGCCGTGCGATTA TTCCCGCCAACATCAACCATCCGGAATCGGAGCCGATGATTATTGGCCGCAACTTCCTGGTCAAAGTGAATGCCAACATC GGTAACTCGGCGGTCACCTCCTCTATCGAAGAAGAGGTGGAAAAATTGGTCTGGTCGACCCGCTGGGGCGCGGACACGGT GATGGACCTCTCCACCGGCCGCTATATCCACGAAACCCGCGAATGGATCCTGCGTAACAGCCCGGTACCGATCGGCACCG TGCCGATCTACCAGGCGCTGGAAAAGGTCAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTG GAGCAGGCCGAACAGGGCGTCGACTACTTCACCATTCACGCGGGCGTGCTGTTGCGCTACGTGCCGATGACCGCCAAACG CCTGACCGGTATTGTCTCGCGCGGCGGTTCGATCATGGCGAAGTGGTGCCTCTCGCATCACAAAGAGAACTTCCTGTTCG AACATTTCCGCGAAATTTGTGAAATCTGCGCCGCCTACGACGTTTCCCTGTCGCTGGGCGACGGCCTGCGCCCCGGCTCC ATTCAGGACGCCAACGACGAAGCGCAGTTCTCCGAGCTGCATACGCTGGGCGAGTTGACCAAAATCGCCTGGGAATACGA CGTGCAGGTGATGATTGAAGGCCCGGGCCACGTGCCGATGCATATGATTCAGCGCAACATGACCGAAGAGCTGGAGAGCT GCCACGAAGCGCCGTTCTACACTTTGGGGCCGTTGACCACCGACATCGCGCCGGGCTATGACCACTTCACCTCCGGGATC GGTGCCGCGATGATCGGCTGGTTTGGCTGCGCGATGCTGTGTTACGTGACGCCGAAAGAACACCTCGGCCTGCCGAACAA AGAAGATGTGAAGCAGGGGCTAATCACCTACAAAATCGCCGCCCACGCCGCGGATTTAGCCAAAGGGCATCCGGGCGCGC AGATTCGCGATAACGCGATGTCGAAAGCACGCTTCGAATTCCGCTGGGAAGACCAGTTTAACCTTGCGCTCGACCCCTTC ACCGCCCGCGCTTATCACGATGAAACCCTGCCGCAGGAGTCCGGTAAGGTCGCTCACTTCTGTTCCATGTGCGGGCCGAA GTTCTGCTCGATGAAAATCAGCCAGGAAGTGCGCGATTACGCCGCTGCACAAACCATTGAAGTCGGCATGGCGGATATGT CGGAGAGCTTCCGCGCCAAAGGCGGCGAAATTTATCTCAAACGGGAGGAAGCCTGA Protein sequence : MSTTTLTRREQRAKAQHFIDTLEGTAFPNSKRIYVTGSQHDIRVPMREIQLSPTLIGGSKDNPQFEENEAVPVYDTSGPY GDPEVAINVQQGLAKLRQPWIDARNDSEELDDRSSAYTRERLADDGLDDLRFTGLLTPKRAKAGHRVTQLHYARQGIVTP EMEFIAIRENMGRERIRSEVLRHQHPGMNFGARLPENITPEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANI GNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNGIAEDLTWEAFRDTLL EQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHKENFLFEHFREICEICAAYDVSLSLGDGLRPGS IQDANDEAQFSELHTLGELTKIAWEYDVQVMIEGPGHVPMHMIQRNMTEELESCHEAPFYTLGPLTTDIAPGYDHFTSGI GAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPF TARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAAAQTIEVGMADMSESFRAKGGEIYLKREEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 72 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 72 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 70 |
