Gene Information

Name : SSPA3374 (SSPA3374)
Accession : YP_002144211.1
Strain : Salmonella enterica AKU12601
Genome accession: NC_011147
Putative virulence/resistance : Virulence
Product : inner membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3744571 - 3745050 bp
Length : 480 bp
Strand : -
Note : similar to Salmonella typhimurium inner membrane protein

DNA sequence : 
ATGAATAATCGTCGTGGTTTAACCGCCGTCCTGGCGACGTTGATTACGTTTTCCCTGAGCGCTACGCCTGTGCTGGCGAA
TCCGGGAAATGGCAATGGCGGCGGACATGGTAATAACGCGGCTAATCAGGGTAATAACGGTAACGGACATAAAGGAAATG
CCGGGCAAAAAACGGAACACCGTAAAAATGGCGGTAAACCGGATCACGTCGAGTCGGACATTAGCTACGCTGTCGCCAGG
CAACTGGCAGTGAATTTAGGGCTGACGGGTTATCAGTCTTTACCTCCGGGGATTGCGAAAAATCTGGCGAGAGGAAAACC
GCTGCCGCCGGGAATCGCTAAAAAAACGGTGCCGGCGTCTATGCTGGGACAATTACCTTATTATCCGGGCTATGAGTGGA
AAATCGTTGGGGATAATCTGGTGCTGATCGCGCTCAGTACCGCGGTGGTCACGGCGATTATTAATGGCGTATTTGATTAA

Protein sequence : 
MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEHRKNGGKPDHVESDISYAVAR
QLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPASMLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cigR NP_462661.1 inner membrane protein Virulence SPI-3 Protein 1e-50 100
cigR AAD16958.1 CigR Virulence SPI-3 Protein 9e-51 100
cigR YP_218670.1 inner membrane protein Not tested SPI-3 Protein 1e-49 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSPA3374 YP_002144211.1 inner membrane protein VFG0573 Protein 4e-51 100