|
Name : rph (SSPA3349) Accession : YP_002144188.1 Strain : Salmonella enterica AKU12601 Genome accession: NC_011147 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : - Position : 3711008 - 3711724 bp Length : 717 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGCGTCCAGCAGGCCGTAGCGCTAATCAGGTGCGTCCCGTAACCCTGACCCGTAACTATACAAAACACGCTGAAGGCTC GGTACTGGTCGAATTTGGAGATACCAAAGTGTTGTGCACTGCCTCCATTGAAGAAGGCGTTCCACGTTTTCTGAAAGGAC AAGGCCAGGGGTGGATCACCGCAGAGTATGGCATGTTACCTCGCGCTACCCATACCCGTAATGCGCGCGAAGCGGCAAAG GGTAAGCAGGGCGGTCGTACTATGGAAATTCAGCGTTTGATCGCGCGTGCGCTGCGTGCGGCGGTCGATCTGAAAACGCT CGGCGAATTTACCATTACGCTGGACTGCGATGTAATCCAGGCAGATGGCGGTACGCGTACAGCGTCTATTACCGGTGCCT GCGTGGCGTTGGCGGATGCGCTGAATAAATTGGTTGCCAACGGTAAGCTGAAAACCAATCCGATGAAAGGCATGGTGGCG GCGGTTTCCGTAGGCATCGTTAACGGCGAAGCGATCTGCGATCTGGAATATGTTGAAGATTCCGCCGCAGAAACCGACAT GAACGTCGTGATGACTGAAGACGGCCGCATTATTGAAGTTCAGGGTACCGCGGAAGGCGAGCCGTTCAGCCATGAAGAAC TTCTCACTTTGTTGGCGCTGGCCCGAGGGGGAATTGAATCCATTGTGGCGACGCAGAAGGCGGCGTTAGAAAATTGA Protein sequence : MRPAGRSANQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWITAEYGMLPRATHTRNAREAAK GKQGGRTMEIQRLIARALRAAVDLKTLGEFTITLDCDVIQADGGTRTASITGACVALADALNKLVANGKLKTNPMKGMVA AVSVGIVNGEAICDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFSHEELLTLLALARGGIESIVATQKAALEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 1e-57 | 59 |
