Name : SSPA3172 (SSPA3172) Accession : YP_002144014.1 Strain : Salmonella enterica AKU12601 Genome accession: NC_011147 Putative virulence/resistance : Virulence Product : ribokinase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0524 EC number : - Position : 3503165 - 3504379 bp Length : 1215 bp Strand : + Note : similar to Salmonella typhi CT18 ribokinase DNA sequence : ATGAAATTTGAACGCCATCATAGAATATTGAAGGAACTCAGTATTTCGGGAGTTGTAAAAGTTTCAAATCTGGCGAAAAG TCTCAAGGTAACAAAGGAAACTATTCGTTCAGATCTCAATGAACTTGCCGGACAGGGATATCTTACTCGCTGTCATGGTG GTGCATTTATTACCCTTGATTCTCTTGATAACGTCGCAAAAAATGAAATTGCTTATGTGCTGGAAAAATATGAATCAGCG CAGAAAATAAAAAAAGGTCTCTCTGCCATGAAAAATAATGTATGTGTTATCGGCTCGTTCAATGTTGATATTATCAGTTA TCTACCGAGATTACCCTCAACGGGAGAATCATTGCTGGCCGATAAATTTATTTTTTCACCCGGCGGTAAGGGATGTAATC AGGCATTAGCAGCAAGCTATGCCGATTCTGATGTGCATTTTATTACTAAAGTAGGGTCAGATCATTTTAGTGATTACGCC ATTAATTTTATAAACTCATCAAAAATCCATAAAAGTGTTATCTACCAGACCAAAGAAACACAAACAGGTACAGCAACCAT CATGGTGAATGGTGATACCGGAGATAACGTCATCGCTATCTACCCTGGCGCCAACATGACAATTTCCCCTGATGAAATCA CCATTCAGAAAGAAGCCATTGTTCATTCAGATATTGTTCTTGTCCAACTGGAGACGAATTACGAAGCGCTGCAGCAAACA ATTCGTCTCGCACAAAAAAATGACATACCGGTCATTATCAATCCAGCGCCATACAATGACATGGTTAACACCATCATTAA TAACATTGACTATATTACGCCAAATGAAACGGAAGCAGGCCTGCTGGCCAATATGGCGGTTAATGATATCGAATCAGCCA AATGCGCGGCCAAAATTATTCATCAGAAAGGCGTCAAAAATACCATTATTACATTAGGTAGCAAAGGTTCGCTTGCTTAT GATGGCACACAATTCATCTATTCCCCGGCATTTCCGGCAGTTGTAAAAAATACGGCGGGAGCGGGTGACGCTTTCAATGG CGCCCTCGCATCTGGTCTTGCAAAAGGAAAGTCACTGGCATCCGCATTGTGCTACGCCAGCGCATTTGCCTCACTTGCGG TTGAAACGCCTAATGCCTCTGATATGCCGGAAAACGACTCCGTTCTTCATCGTATTCAGGGTTCACATTACAAACAAACT ATCTCTACTCACTAA Protein sequence : MKFERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLDNVAKNEIAYVLEKYESA QKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLLADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYA INFINSSKIHKSVIYQTKETQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQT IRLAQKNDIPVIINPAPYNDMVNTIINNIDYITPNETEAGLLANMAVNDIESAKCAAKIIHQKGVKNTIITLGSKGSLAY DGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSLASALCYASAFASLAVETPNASDMPENDSVLHRIQGSHYKQT ISTH |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
APECO1_1076 | YP_853096.1 | carbohydrate kinase | Not tested | PAI IV APEC-O1 | Protein | 8e-156 | 81 |
rbsk | YP_216390.1 | DeoR family transcriptional regulator | Not tested | SPI-2 | Protein | 2e-71 | 48 |
orf408 | NP_460347.1 | regulatory protein | Not tested | SPI-2 | Protein | 2e-71 | 48 |
ORF 408 | CAB37417.1 | - | Not tested | SPI-2 | Protein | 1e-71 | 48 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
SSPA3172 | YP_002144014.1 | ribokinase | VFG0483 | Protein | 7e-72 | 48 |