|
Name : SSPA3166 (SSPA3166) Accession : YP_002144008.1 Strain : Salmonella enterica AKU12601 Genome accession: NC_011147 Putative virulence/resistance : Unknown Product : insertion sequence element IS200 transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1943 EC number : - Position : 3496256 - 3496714 bp Length : 459 bp Strand : - Note : similar to Salmonella typhi Ty2 transposase for insertion sequence element IS200 DNA sequence : ATGGGGGACGAAAAGAGCTTAGCGCACACCCGATGGAACTGTAAATATCACATAGTTTTCGCGACCAAATACCGAAGACA AGCGTTCTATGGAGAGAAGCGTAGGGCAGTAGGCAGCATATTAAGAAAATTGTGTGAATGGAAAAACGTACGAATTCTGG AAGCAGAATGTTGTGCAGATCATATTCACATGCTTCTGGAGATCCCGCCGAAGATGAGTGTGTCGAGTTTCATGGGATAT CTGAAGGGTAAAAGTAGTCTGATGCTTTACGAGCAGTTTGGGGATCTAAAATTCAAATACAGGAACAGGGAGTTCTGGTG CAGAGGGTACTATGTCGATACGGTGGGTAAGAACACGGCGAAGATACAGGACTACATAAAGCACCAGCTTGAAGAGGATA AAATGGGTGAGCAATTATCGATCCCGTATCCGGGCAGCCCGTTTACGGGCCGTAAGTAA Protein sequence : MGDEKSLAHTRWNCKYHIVFATKYRRQAFYGEKRRAVGSILRKLCEWKNVRILEAECCADHIHMLLEIPPKMSVSSFMGY LKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | NP_455584.1 | transposase for insertion sequence element is200 | Not tested | SPI-5 | Protein | 1e-68 | 99 |
| CPR_0382 | YP_697711.1 | IS1469, transposase | Not tested | Not named | Protein | 8e-44 | 65 |
| SP_1064 | NP_345538.1 | IS200 family transposase | Not tested | PPI-1 | Protein | 2e-46 | 62 |
| EF0615 | NP_814372.1 | IS200 family transposase | Not tested | Not named | Protein | 1e-31 | 53 |
| ef0123 | AAM75324.1 | EF0123 | Not tested | Not named | Protein | 8e-32 | 53 |
