Gene Information

Name : SSPA2570 (SSPA2570)
Accession : YP_002143415.1
Strain : Salmonella enterica AKU12601
Genome accession: NC_011147
Putative virulence/resistance : Virulence
Product : virulence secretory protein
Function : -
COG functional category : N : Cell motility
COG ID : COG1450
EC number : -
Position : 2851669 - 2853357 bp
Length : 1689 bp
Strand : -
Note : similar to Salmonella typhi CT18 secretory protein (associated with virulence)

DNA sequence :
ATGAAGACACATATTCTTTTGGCCAGAGTGCTGGCATGTGCCGCGCTTGTTCTGGTTGCACCTGGTTATTCTAGTGAAAA
AATACCTGTAACGGGAAGTGGGTTTGTTGCGAAAGACGATAGCCTGCGGACATTTTTCGATGCCATGGCGCTACAGCTAA
AGGAGCCTGTCATTGTTAGCAAAATGGCGGCACGAAAAAAAATTACGGGCAACTTTGAGTTTCACGATCCTAACGCATTA
CTGGAGAAGCTTTCCCTACAACTGGGGCTGATTTGGTATTTCGATGGGCAGGCTATCTATATTTATGACGCCAGTGAAAT
GCGCAATGCCGTGGTTTCTTTACGCAACGTCTCACTCAATGAGTTCAACAATTTTCTAAAACGCTCAGGTTTATATAACA
AAAATTACCCGCTACGTGGCGATAACCGTAAAGGAACATTCTATGTTTCAGGGCCACCCGTCTATGTTGATATGGTGGTC
AACGCCGCCACCATGATGGACAAGCAAAACGATGGTATTGAGCTGGGACGCCAGAAAATAGGGGTGATGCGTCTGAACAA
TACCTTCGTGGGCGATCGTACCTACAATCTGCGCGATCAGAAAATGGTTATTCCCGGTATTGCTACGGCCATTGAAAGGT
TATTGCAGGGAGAAGAGCAACCCTTAGGTAATATTGTCAGTAGCGAACCCCCGGCGATGCCAGCATTTTCAGCGAATGGA
GAAAAAGGTAAAGCAGCAAATTATGCCGGTGGCATGAGTCTGCAGGAAGCTTTAAAGCAAAATGCCGCGGCGGGCAATAT
TAAAATCGTGGCCTATCCGGATACCAACAGTTTGTTAGTAAAGGGAACGGCTGAGCAGGTGCATTTTATCGAAATGCTGG
TTAAAGCGCTGGATGTCGCCAAACGTCACGTAGAATTATCCCTGTGGATTGTCGATCTTAATAAAAGCGATCTGGAGCGT
TTGGGCACTTCATGGAGCGGCAGCATAACTATTGGGGACAAACTTGGCGTGTCATTAAACCAGTCTTCAATAAGTACCCT
CGATGGCAGCCGATTCATCGCCGCGGTCAATGCGTTAGAAGAGAAGAAACAGGCGACGGTGGTTTCGCGTCCGGTATTAC
TGACTCAGGAAAATGTTCCCGCTATTTTTGATAACAACAGAACGTTTTACACCAAGCTGATTGGGGAACGTAATGTGGCG
CTTGAGCATGTAACATACGGAACAATGATCCGAGTGCTGCCCCGTTTTTCCGCAGATGGTCAGATAGAAATGTCGCTGGA
CATTGAAGATGGCAACGATAAGACGCCGCAATCCGATACTACCACCTCCGTAGATGCGTTACCCGAAGTCGGGCGAACGT
TAATTAGCACTATTGCAAGAGTTCCGCACGGAAAAAGTTTGCTGGTCGGTGGTTATACACGGGATGCAAATACCGATACT
GTCCAAAGTATTCCGTTTTTAGGCAAATTACCGCTTATTGGTAGCCTGTTCCGTTATTCCAGTAAGAATAAAAGTAATGT
TGTTCGTGTGTTCATGATTGAACCAAAAGAAATTGTCGACCCGTTAACGCCGGATGCCAGCGAATCGGTAAACAATATTC
TGAAGCAAAGCGGTGCCTGGAGTGGGGACGATAAGTTACAGAAATGGGTTCGTGTTTATCTGGATAGAGGTCAGGAGGTA
ATTAAATGA

Protein sequence :
MKTHILLARVLACAALVLVAPGYSSEKIPVTGSGFVAKDDSLRTFFDAMALQLKEPVIVSKMAARKKITGNFEFHDPNAL
LEKLSLQLGLIWYFDGQAIYIYDASEMRNAVVSLRNVSLNEFNNFLKRSGLYNKNYPLRGDNRKGTFYVSGPPVYVDMVV
NAATMMDKQNDGIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQGEEQPLGNIVSSEPPAMPAFSANG
EKGKAANYAGGMSLQEALKQNAAAGNIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLER
LGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVA
LEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDT
VQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRGQEV
IK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
invG NP_457292.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 0.0 99
invG NP_806501.1 virulence-associated secretory protein Virulence SPI-1 Protein 0.0 99
invG NP_461819.1 outer membrane secretin precursor Virulence SPI-1 Protein 0.0 99
invG YP_217817.1 invasion protein; outer membrane Virulence SPI-1 Protein 0.0 99
ECs3733 NP_311760.1 EivG Not tested LIM Protein 2e-145 55
invG AAS66859.1 InvG Not tested SSR-2 Protein 4e-132 50
ysaC AAS66838.1 YsaC Not tested SSR-1 Protein 1e-92 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSPA2570 YP_002143415.1 virulence secretory protein VFG0559 Protein 0.0 99
SSPA2570 YP_002143415.1 virulence secretory protein VFG1004 Protein 1e-125 51
SSPA2570 YP_002143415.1 virulence secretory protein VFG2463 Protein 4e-103 43