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Name : SSPA2560 (SSPA2560) Accession : YP_002143405.1 Strain : Salmonella enterica AKU12601 Genome accession: NC_011147 Putative virulence/resistance : Virulence Product : virulence secretory protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4791 EC number : - Position : 2842662 - 2843453 bp Length : 792 bp Strand : - Note : similar to Salmonella typhi CT18 secretory protein (associated with virulence) DNA sequence : ATGCTTTACGCGTTGTACTTTGAAATTCATCACCTTGTTGCGTCTGCGGCACTAGGGTTTGCTCGCGTAGCGCCGATTTT TTTCTTCCTGCCGTTTTTGAATAGCGGGGTATTAAGCGGCGCGCCGAGAAACGCCATTATCATCCTGGTGGCATTGGGAG TATGGCCGCATGCATTGAACGAGGCGCCGCCGTTTTTATCGGTGGCGATGATCCCGTTAGTTCTGCAAGAAGCGGCGGTA GGCGTCATGCTGGGCTGTCTGCTGTCATGGCCTTTTTGGGTTATGCATGCGCTGGGTTGTATTATCGATAACCAGCGAGG GGCAACGCTAAGTAGCAGTATCGATCCGGCAAACGGTATTGATACCTCGGAAATGGCTAATTTCCTGAATATGTTTGCCG CTGTCGTTTATTTACAAAACGGCGGTCTGGTCACGATGGTTGACGTGTTAAATAAAAGCTATCAGCTATGCGATCCGATG AACGAGTGCACGCCTTCATTACCGCCGCTATTAACGTTTATTAATCAGGTGGCTCAAAACGCCTTGGTTCTGGCCAGTCC GGTGGTATTAGTGCTGTTGCTGTCAGAAGTATTCCTGGGTTTATTGTCGCGCTTTGCTCCGCAAATGAACGCTTTTGCGA TTTCACTGACGGTAAAAAGCGGCATTGCCGTTTTAATTATGCTGCTTTATTTCTCTCCGGTACTACCGGACAATGTACTG CGACTCTCTTTCCAGGCCACAGGGTTAAGCAGTTGGTTTTACGAGCGAGGGGCGACGCATGTCCTCGAATAA Protein sequence : MLYALYFEIHHLVASAALGFARVAPIFFFLPFLNSGVLSGAPRNAIIILVALGVWPHALNEAPPFLSVAMIPLVLQEAAV GVMLGCLLSWPFWVMHALGCIIDNQRGATLSSSIDPANGIDTSEMANFLNMFAAVVYLQNGGLVTMVDVLNKSYQLCDPM NECTPSLPPLLTFINQVAQNALVLASPVVLVLLLSEVFLGLLSRFAPQMNAFAISLTVKSGIAVLIMLLYFSPVLPDNVL RLSFQATGLSSWFYERGATHVLE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaR | YP_217807.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 6e-103 | 99 |
| spaR | NP_457282.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 7e-105 | 99 |
| spaR | NP_806491.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 7e-105 | 99 |
| spaR | NP_461809.1 | needle complex export protein | Virulence | SPI-1 | Protein | 3e-105 | 99 |
| spaR | AAS66867.1 | SpaR | Not tested | SSR-2 | Protein | 6e-33 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SSPA2560 | YP_002143405.1 | virulence secretory protein | VFG0549 | Protein | 1e-105 | 99 |
| SSPA2560 | YP_002143405.1 | virulence secretory protein | VFG1014 | Protein | 6e-36 | 52 |
| SSPA2560 | YP_002143405.1 | virulence secretory protein | VFG2453 | Protein | 6e-32 | 45 |
