|
Name : SSPA2545 (SSPA2545) Accession : YP_002143390.1 Strain : Salmonella enterica AKU12601 Genome accession: NC_011147 Putative virulence/resistance : Virulence Product : pathogenicity island 1 effector protein Function : - COG functional category : - COG ID : - EC number : - Position : 2826157 - 2826399 bp Length : 243 bp Strand : - Note : similar to Salmonella typhi CT18 pathogenicity 1 island effector protein DNA sequence : ATGCCAACACCTTGGTCAGGCTATCTGGATGAAGTTTCAGCAAAATTTGATACGGGCGTTGATGATCTACAAACGCAGGT AACAGAGGCGCTGGATAAATTAGCAGCAAAACCCTCCGATCCGGCGCTACTGGCGGCGTATCAGAGTAAGCTCTCGGAAT ATAACTTGTACCGTAACGCGCAATCGAACACGGTAAAAGTCTTTAAGGATATTGATGCTGCCATTATTCAGAACTTCCGT TAA Protein sequence : MPTPWSGYLDEVSAKFDTGVDDLQTQVTEALDKLAAKPSDPALLAAYQSKLSEYNLYRNAQSNTVKVFKDIDAAIIQNFR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prgI | YP_217792.1 | cell invasion protein | Virulence | SPI-1 | Protein | 3e-30 | 97 |
| prgI | NP_461794.1 | needle complex major subunit | Virulence | SPI-1 | Protein | 3e-30 | 97 |
| prgI | AAX49613.1 | PrgI | Virulence | SPI-1 | Protein | 2e-30 | 97 |
| prgI | NP_457267.1 | pathogenicity 1 island effector protein | Virulence | SPI-1 | Protein | 5e-30 | 97 |
| prgI | NP_806476.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 5e-30 | 97 |
| ECs3718 | NP_311745.1 | EprI | Not tested | LIM | Protein | 5e-20 | 63 |
| ysaG | AAS66835.1 | YsaG | Not tested | SSR-1 | Protein | 1e-16 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SSPA2545 | YP_002143390.1 | pathogenicity island 1 effector protein | VFG0535 | Protein | 7e-31 | 97 |
| SSPA2545 | YP_002143390.1 | pathogenicity island 1 effector protein | VFG0996 | Protein | 4e-19 | 69 |
| SSPA2545 | YP_002143390.1 | pathogenicity island 1 effector protein | VFG2466 | Protein | 1e-17 | 57 |
