Gene Information

Name : SSPA2544 (SSPA2544)
Accession : YP_002143389.1
Strain : Salmonella enterica AKU12601
Genome accession: NC_011147
Putative virulence/resistance : Virulence
Product : pathogenicity island 1 effector protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2825833 - 2826138 bp
Length : 306 bp
Strand : -
Note : similar to Salmonella typhi CT18 pathogenicity 1 island effector protein

DNA sequence : 
ATGTCGATTGCAACTATTGTCCCTGAGAATGCCGTTATAGGGCAGGCGGTCAATATCAGGTCTATGGAAACGGACATTGT
CTCGCTGGATGACCGGCTACTCCAGGCTTTTTCTGGTTCGGCGATTGCCACGGCTGTGGATAAACAGACGATTACCAACA
GGATTGAGGACCCTAATCTGGTGACGGATCCTAAAGAGCTGGCTATTTCGCAAGAGATGATTTCAGATTATAACCTGTAT
GTTTCTATGGTCAGTACCCTTACTCGTAAAGGAGTCGGGGCTGTTGAAACGCTATTACGCTCATGA

Protein sequence : 
MSIATIVPENAVIGQAVNIRSMETDIVSLDDRLLQAFSGSAIATAVDKQTITNRIEDPNLVTDPKELAISQEMISDYNLY
VSMVSTLTRKGVGAVETLLRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prgJ YP_217791.1 cell invasion protein Virulence SPI-1 Protein 1e-40 100
prgJ NP_461793.1 needle complex minor subunit Virulence SPI-1 Protein 1e-40 100
prgJ NP_457266.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 5e-40 99
prgJ NP_806475.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 5e-40 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSPA2544 YP_002143389.1 pathogenicity island 1 effector protein VFG0534 Protein 4e-41 100