Gene Information

Name : SSPA2538 (SSPA2538)
Accession : YP_002143383.1
Strain : Salmonella enterica AKU12601
Genome accession: NC_011147
Putative virulence/resistance : Virulence
Product : AraC family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2821038 - 2821793 bp
Length : 756 bp
Strand : -
Note : similar to Salmonella typhi CT18 possible AraC-family transcriptional regulator

DNA sequence : 
ATGAGAAATGTAATTATATACGGTATTAACTGGACTAATTGTTATGCCCTTCAGTCTATTTTTAAGCAAAAATATCCGGA
AAAGTGCGTTAAAACATGTAACTCATTAACCGCACTTTTGCATTCTCTATCTGATATGCCGGACGCCGGGCTGATTTTAG
CTTTGAACCCGCATGAGCATGTTTATCTTTTTCATGCGTTGCAGGCGCGGTTGCAGAACCGTAAAGCTTTGGTAGTGGCA
GATCGCTTGTATTATATCGATCGCTGTGTGCTGCAATATTTTGGCGTTATGGATTATGTTTTAAAAGACGAACTATCCTG
CGCTATCCGCTCGGATCGAGAGAAGCTCCGTCTTCCGGAAGCCTGGCTGCGTTTCTGCCACAGGCCACAAAAGAAAACCG
TGGCTGCTACGTATGCTTTTAATGCCGGCGAGACGCCGGAAGAGGTATTGTTTAATATCAATCAATACGCCTGGTGGAAT
CTACCTCCCGGTGTCACGCAGGCGAAATATGCGCTGCTGATATTATTATCCTCTGGACATCCGGCAATTGAACTGGCGAA
AAAATTTGGTCTGGGAACAAAAACCGTCAGTATTTATCGTAAGAAGGTTATGTATCGTTTGGGGATGGACTCTTCACCGC
TATCTCTGTTCCGGGGACTGAAACTAGACGCGCATTTACAGCGCACTGCTTTTGCACATAACCCTGCTGTACCTGACGAT
AATTGCGCGTTACCGATTGCAGTAGGAATGAATTAA

Protein sequence : 
MRNVIIYGINWTNCYALQSIFKQKYPEKCVKTCNSLTALLHSLSDMPDAGLILALNPHEHVYLFHALQARLQNRKALVVA
DRLYYIDRCVLQYFGVMDYVLKDELSCAIRSDREKLRLPEAWLRFCHRPQKKTVAATYAFNAGETPEEVLFNINQYAWWN
LPPGVTQAKYALLILLSSGHPAIELAKKFGLGTKTVSIYRKKVMYRLGMDSSPLSLFRGLKLDAHLQRTAFAHNPAVPDD
NCALPIAVGMN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sprB YP_217785.1 transcriptional regulator Virulence SPI-1 Protein 7e-116 99
sprB NP_461787.1 transcriptional regulator Virulence SPI-1 Protein 7e-116 99
sprB NP_457260.1 possible AraC-family transcriptional regulator Virulence SPI-1 Protein 1e-116 99
sprB NP_806469.1 AraC family transcriptional regulator Virulence SPI-1 Protein 1e-116 99
sprB AAD37785.1 transcriptional regulator SprB Virulence SPI-1 Protein 5e-116 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSPA2538 YP_002143383.1 AraC family transcriptional regulator VFG0530 Protein 3e-116 99