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Name : SSPA2404 (SSPA2404) Accession : YP_002143249.1 Strain : Salmonella enterica AKU12601 Genome accession: NC_011147 Putative virulence/resistance : Unknown Product : capsid protein Function : - COG functional category : - COG ID : - EC number : - Position : 2675996 - 2676829 bp Length : 834 bp Strand : - Note : similar to Salmonella typhi CT18 capsid protein DNA sequence : ATGACAGTGAAAGCAAAGCGTTTCCGCATCGGGGTGGAAGGTGCCACCACTGACGGGCGCGAGATCCAGCGTGAATGGCT GGTACAGATGGCTGCCAGCTACAACCCGACGGTCTATACCGCGCTGATTAACCTTGAGCACATCAAGTCTTATCTGCCGG AGAGCACTTTTAACCGCTATGGCAGGGTGACGGGGCTGGTTGCAGAAGAAATCCAGGACGGCCCGCTGGCGGGCAAGATG GCACTTTATGCCGATATCGAACCCACTGACGCCCTGGTGGAACTGGTGAAAAAAGGCCAGAAGCTTTTCACCTCCATGGA GGTCAGCACGAAGTTTGCCGACACCGGCAAAGCCTACCTTGTGGGGCTGGGTGCGACGGACGATCCTGCGAGCCTTGGCA CCGAAATGCTGGCTTTCAGCGCCAGCGCCGCACATAACCCGCTGGCAAACCGTAAGCAGAACCCTGAAAACCTGTTTTCG GAAGCGGTTGAAACGCTGATCGAACTGGAAGAAGCCCAGGACGAAAAGCCGTCCCTCTTTGCCAGCGTCACCGCGCTGTT CACCAAAAAAGAGCAGACCGACGATGCGCGTTTCTCCGATGTGCATAAAGCCGTGGAACTTGTCGCCACCGAGCAGCAGA ACCTGAGCGAGCGCACTGATAAATCCCTGGCTGAAAACGGTGAGCGCCTTTCCGCGCTGGAGTCCTCCCTGCAGGAACAG CAGACCGCCTTTGCCGAGCTACAGCAGCAACTGAGCCGCGAAGACAGCCGCAAGGATTACCGCCAGCGCGCGCCGGGCGG TGACGCACCGGCAGGCACCCTGACCAATTGCTGA Protein sequence : MTVKAKRFRIGVEGATTDGREIQREWLVQMAASYNPTVYTALINLEHIKSYLPESTFNRYGRVTGLVAEEIQDGPLAGKM ALYADIEPTDALVELVKKGQKLFTSMEVSTKFADTGKAYLVGLGATDDPASLGTEMLAFSASAAHNPLANRKQNPENLFS EAVETLIELEEAQDEKPSLFASVTALFTKKEQTDDARFSDVHKAVELVATEQQNLSERTDKSLAENGERLSALESSLQEQ QTAFAELQQQLSREDSRKDYRQRAPGGDAPAGTLTNC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4626 | NP_458708.1 | putative capsid protein | Not tested | SPI-7 | Protein | 2e-125 | 100 |
| t4320 | NP_807915.1 | capsid protein | Not tested | SPI-7 | Protein | 2e-125 | 100 |
| unnamed | ABR13465.1 | putative capsid scaffold | Not tested | PAGI-6 | Protein | 2e-49 | 47 |
