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Name : SSPA0021 (SSPA0021) Accession : YP_002140869.1 Strain : Salmonella enterica AKU12601 Genome accession: NC_011147 Putative virulence/resistance : Virulence Product : fimbrial usher Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 25836 - 28457 bp Length : 2622 bp Strand : + Note : similar to Salmonella typhimurium fimbrial usher DNA sequence : ATGCGTAATCAGCTTTTCATGACGCGATATTACTCCAGCGTAGCTAAACCCGTATTAACTCCGCTGGCGTTGGCTATCGC ACTGGCGCCTGCGCCTGGGTGGGCGGAAAACTATTTCAACCCGGCATTTCTGTCTGACGACCCGTCTGCGGTGGCCGACT TATCGACCTTTTCCCGTAATGCCCAGGCGGCGGGAATGTATCGCGTTGACGTTTACCTGAACAATACGTTTCTCGCGACC AGAGACATTGCCTTCCAGGCGGTGAAGACGACGGGAAAAAGCGCGCCCACCGATGACAGCGGATTACGCGCCTGCCTGAC GCCTGAAATGCTTAAAAATATGGGGGTAAACACCGGGGCATTTCCACTGTTGGCGAAGGCGGCGGCGGGAAGTTGTCCGG ATCTCGCCAGTGCGATACCGGCCGCCCGGACCCGCTTTGATTTTGCGCAGCAACGTCTCGACATTAGCATCCCGCAGGCG GCGATGGTTGCCAGCGCCAGAGGCTATATCCCACCGCAATACTGGGATGAAGGTATTAACGCGTTGCTATTTAATTACAC CTTTACCGGCGCGAATAGTCAGGATCGGAGCCCTGGCGGCAGTGCGGAGAACAGCTATTTTCTTGGATTGAATAGCGGCC TTAATCTGGGGGCCTGGCGGTTACGCGACTACTCCACATGGAACGCGAATAGCGGCGATCAGAATAGCGACAGCGACTGG CAGCACATCAGTACTCATCTGGAACGTGATGTGGTCTTTTTGCAGGGAGAACTGACGGCAGGCGATAGTTATACCCCCTC CGCATTATTCGACAGCCTTCCTTTTCGCGGACTACAACTGGCGTCTGACGACAATATGTTGCCAGACAGCATGAAGGGCT TCGCGCCGACCATTCACGGCATTGCCAGAAGCAACGCGCAAGTGACCATTCGGCAAAACGGCTACATCATCAATCAGCGC TATGTGCCGCCCGGGGCATTTACTATTAATGATCTCTATCCTACCGCCGCCAGCGGTGATTTGACTGTGGAAGTCAAAGA GTCCGACGGTTCTATTAATCGCTATAACGTGCCCTATTCCGCCGTGCCGATTCTACAACGAGAAGGGCGGCTGAAGTATG CGGCGACGGTGGCGGAGTATCGCAGCGATAGTAGTCAAAAAGAGAAGGTGAAATTCAGTCAGGCGACCTTGATATGGGGG TTACCGCATGGTTTTACGCTGTATGGCGGAACACAACTTTCCAGTCATTATCACGCGCTGGCGATCGGCAGCGGCGCAAA TCTGGGCGACTGGGGCGCGGTGTCGCTGGATGTCACCCAGGCTACCAGTACGCTGGCGGATAATAACACCTACCAGGGGC AATCGCTGCGTTTCCTGTATGCCAAATCGCTTGCACAGTCAGGAACCAATTTACAGCTTATGGGTTATCGCTATTCAACC TCGGGCTTTTATACGCTGGATGATACCACGTGGAAACGGATGAGCGGCTATGACGATGACAATCGGACTGACAGCGATAA AAGCAGGCCGGAATGGGCGGATTATTACAATCTTTATTATACCAGGAGGGGCAAAGTACAACTCGATATCAATCAACAGC TAGGCGGGTTGGGATCGCTTTTTATTACCGGCAGTCAGCAAAGTTACTGGCACACTGATGAAAAGGATTCTTTGTTGCAG GTGGGATACAGCGATACGCTGGCGGGTATTGCATGGAGCGTTTCTTACAACAATAACAAATCCGCAGGCGATGCGGAGCG CGATCAAATTTTCGCCCTGAATATCTCGGTGCCGCTAAGTCAATGGCTGCAACATGATGATGAGGTCACGCACCATCACA ATGTTTACGCTACCTTTAGCACCAGTACGGACAAACAGCATAACGTTACGCAGAATGCGGGCCTTAGCGGCACACTACTG GACGAAAACAATCTTAGTTACAACATACAGCAAGGCTATCAGAATCACGGTATTGGCGAAAGCGGCGCCGCCAGCCTGGA ATACGATGGGGCGAAAGGCAACGCCAATATTGGCTATAACGTTAGCGATAACGGCGATTACCAGCAGGTGAATTATGGCC TGAGCGGCGGCCTGGTGGCGCACGCGCATGGAGTGACGCTAAGCCAGCCGTTAGGCAATACCAATATTTTGATTGCCGCG CCGGGCGCAGCCAATGTCGGCGTTGTCGACCAGCCGGGTATTCATACGGACGCGCGTGGCTATGCGGTGGTGCCGTATGC GACGACATATCGCCAAAACCGTATGGCGCTGGACGTTAACGCCATGGCTGATGATGTCGATATTGATGACGCGGTGACTC GCGTTGTGCCGACCGAAGGCGCGCTGGTTCTGGCCCGCTTTAAAGCGCGAGTCGGCGTGCGTGCCCTGGTAACGCTGAAT CATAATGGTAAGCCTGTACCCTTTGGCGCAACGGTGACGGTGAATGATCGCCATGCGGAGGCGATTGTTGACGAGGCCGG GGAGGTCTATCTTTCCGGGTTGTCAGCGCAAGGCGTTCTGCACGTTCGCTGGGGGAACCTGCCGGATCAACAGTGCGTCG CGTCCTATCATCTCTCTTCCTCCCGTCAGATTCTGAGTCGACAACATGCGGAGTGTCATTAA Protein sequence : MRNQLFMTRYYSSVAKPVLTPLALAIALAPAPGWAENYFNPAFLSDDPSAVADLSTFSRNAQAAGMYRVDVYLNNTFLAT RDIAFQAVKTTGKSAPTDDSGLRACLTPEMLKNMGVNTGAFPLLAKAAAGSCPDLASAIPAARTRFDFAQQRLDISIPQA AMVASARGYIPPQYWDEGINALLFNYTFTGANSQDRSPGGSAENSYFLGLNSGLNLGAWRLRDYSTWNANSGDQNSDSDW QHISTHLERDVVFLQGELTAGDSYTPSALFDSLPFRGLQLASDDNMLPDSMKGFAPTIHGIARSNAQVTIRQNGYIINQR YVPPGAFTINDLYPTAASGDLTVEVKESDGSINRYNVPYSAVPILQREGRLKYAATVAEYRSDSSQKEKVKFSQATLIWG LPHGFTLYGGTQLSSHYHALAIGSGANLGDWGAVSLDVTQATSTLADNNTYQGQSLRFLYAKSLAQSGTNLQLMGYRYST SGFYTLDDTTWKRMSGYDDDNRTDSDKSRPEWADYYNLYYTRRGKVQLDINQQLGGLGSLFITGSQQSYWHTDEKDSLLQ VGYSDTLAGIAWSVSYNNNKSAGDAERDQIFALNISVPLSQWLQHDDEVTHHHNVYATFSTSTDKQHNVTQNAGLSGTLL DENNLSYNIQQGYQNHGIGESGAASLEYDGAKGNANIGYNVSDNGDYQQVNYGLSGGLVAHAHGVTLSQPLGNTNILIAA PGAANVGVVDQPGIHTDARGYAVVPYATTYRQNRMALDVNAMADDVDIDDAVTRVVPTEGALVLARFKARVGVRALVTLN HNGKPVPFGATVTVNDRHAEAIVDEAGEVYLSGLSAQGVLHVRWGNLPDQQCVASYHLSSSRQILSRQHAECH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 51 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 0.0 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SSPA0021 | YP_002140869.1 | fimbrial usher | VFG0876 | Protein | 0.0 | 52 |
| SSPA0021 | YP_002140869.1 | fimbrial usher | VFG0446 | Protein | 0.0 | 50 |
| SSPA0021 | YP_002140869.1 | fimbrial usher | VFG1645 | Protein | 0.0 | 50 |
| SSPA0021 | YP_002140869.1 | fimbrial usher | VFG0912 | Protein | 0.0 | 50 |
| SSPA0021 | YP_002140869.1 | fimbrial usher | VFG0454 | Protein | 6e-165 | 43 |
