Gene Information

Name : SSPA0020 (SSPA0020)
Accession : YP_002140868.1
Strain : Salmonella enterica AKU12601
Genome accession: NC_011147
Putative virulence/resistance : Virulence
Product : fimbrial chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 25145 - 25831 bp
Length : 687 bp
Strand : +
Note : similar to Salmonella typhi CT18 fimbrial chaperone

DNA sequence : 
ATGAAAAAAAACGTACCGATTTTCCTTCGATTATTGCTACTGCTGTCGGCGGCCGGCCTGTCGTTTGCCGTGCAGGCGGG
AGGCATTGCGCTGGGCGCGACTAGGGTGATTTATCCGCAGGGAAGTAAGCAAACCTCCTTGCCGATTATTAATTCTTCTG
CCAGCAATGTTTTTTTAATTCAGTCGTGGGTCGCCAATGCCGATGGTTCACGCTCGACGGATTTTATCATTACGCCGCCT
CTCTTTGTGATCCAGCCTAAAAAAGAAAATATATTACGTATTATGTATGTCGGGCCGTCATTACCGACCGATCGCGAAAG
CGTGTTTTATTTAAACAGTAAAGCGATACCCTCTGTCGATAAAAATAAACTGACCGGCAACTCCCTGCAAATTGCGACGC
AAAGCGTGATTAAGCTATTTATCCGCCCGAAAAATCTGGCGGAGGCGCCAGCCCATGCCCCGGTAACGCTTCGCTGCCGT
AACGAGCGCGGCCAGCTAACGATTACTAACCCTTCGCCGTACTACGTTTCGATGGTTGAACTGTACAGCGCGGGGAAAAA
ACTGCCGAATACTATGGTACCGCCGAAAGGCGCGATCACTATCCCGGCGACGCCTGGCCAGGTATCTTTGCGCACGGTAA
ACGATTTTGGCGCAACGACGCCAGCACGCGTTTGTCCAGCTTCATGA

Protein sequence : 
MKKNVPIFLRLLLLLSAAGLSFAVQAGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPP
LFVIQPKKENILRIMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPVTLRCR
NERGQLTITNPSPYYVSMVELYSAGKKLPNTMVPPKGAITIPATPGQVSLRTVNDFGATTPARVCPAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 1e-44 49
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 3e-42 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSPA0020 YP_002140868.1 fimbrial chaperone VFG0445 Protein 7e-49 52
SSPA0020 YP_002140868.1 fimbrial chaperone VFG0875 Protein 1e-45 51
SSPA0020 YP_002140868.1 fimbrial chaperone VFG1644 Protein 2e-42 49
SSPA0020 YP_002140868.1 fimbrial chaperone VFG0911 Protein 2e-42 49
SSPA0020 YP_002140868.1 fimbrial chaperone VFG0455 Protein 5e-35 42