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Name : SSPA1707 (SSPA1707) Accession : YP_002142545.1 Strain : Salmonella enterica AKU12601 Genome accession: NC_011147 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 1902588 - 1903880 bp Length : 1293 bp Strand : - Note : 'catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA' DNA sequence : ATGCTCGATCCCAATCTGCTGCGTAATGAGCCAGACGCAGTCGCTGAAAAACTGGCACGCCGGGGCTTTAAGCTGGATGT AGATAAGCTGCGCGCTCTTGAAGAGCGTCGTAAAGTTTTGCAGGTCAACACGGAAAACCTGCAGGCGGAGCGTAATTCTC GATCGAAATCCATCGGCCAGGCGAAAGCGCGCGGGGAAGATATCGAGCCTTTACGCCTGGAAGTGAATAAACTGGGCGAA GAGCTGGATGCGGCGAAAGCCGAGCTGGATACCTTGCTGGCGGAGATCCGCGATATCGCGCTGACCATCCCAAACCTGCC TGCGGATGAAGTGCCGGTAGGTAAAGATGAAAACGACAACGTTGAAGTCAGCCGCTGGGGTACCCCGCGTGAGTTTGATT TTGAAATCCGCGATCACGTCACCTTAGGGGAAATGCACTCCGGCCTCGACTTTGCCGCCGCGGTTAAGCTGACCGGCTCC CGTTTTGTGGTGATGAAAGGACAGATTGCGCGTATGCATCGCGCATTGTCGCAGTTCATGTTGGATCTGCATACGGAACA GCACGGCTATAGCGAAAACTACGTGCCGTATCTGGTTAACCACGACACGCTGTATGGCACCGGTCAACTGCCGAAATTCG CAGGCGACTTGTTCCATACCCGTCCGCTGGAAGAAGAAGCAGACAGCAGCAACTATGCTTTGATCCCGACGGCGGAGGTT CCGCTGACCAATCTGGTACGCGATGAAATCATCGACGAAGATCAGCTGCCGATTAAAATGACGGCGCATACGCCTTGTTT CCGTTCTGAAGCAGGTTCTTATGGTCGTGATACCCGTGGCCTGATTCGTATGCATCAGTTTGACAAAGTGGAAATGGTGC AGATCGTTCGCCCGGAAGATTCTATGGCTGCGTTGGAAGAGATGACCGGTCACGCGGAAAAAGTGCTCCAGCTACTGGGA CTGCCGTACCGTAAAATTATTCTGTGCACTGGCGATATGGGCTTCGGCGCCTGCAAAACCTATGACCTCGAAGTCTGGGT TCCGGCGCAGAATACCTACCGCGAGATCTCTTCCTGCTCTAACGTCTGGGACTTCCAGGCGCGTCGTATGCAGGCACGCT GTCGCAGCAAGTCCGACAAAAAGACCCGTCTGGTCCATACCCTGAATGGTTCTGGTCTGGCGGTAGGTCGTACCCTGGTG GCCGTGATGGAAAACTATCAGCAGGCTGATGGCCGCATTGAAGTGCCGGAAGTATTACGTCCGTACATGAACGGACTGGA ATATATCGGCTAA Protein sequence : MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGE ELDAAKAELDTLLAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEIRDHVTLGEMHSGLDFAAAVKLTGS RFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTAEV PLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLG LPYRKIILCTGDMGFGACKTYDLEVWVPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLV AVMENYQQADGRIEVPEVLRPYMNGLEYIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-107 | 57 |
