Gene Information

Name : SSPA1354 (SSPA1354)
Accession : YP_002142193.1
Strain : Salmonella enterica AKU12601
Genome accession: NC_011147
Putative virulence/resistance : Virulence
Product : pathogenicity island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1523552 - 1523878 bp
Length : 327 bp
Strand : -
Note : similar to Salmonella typhi CT18 pathogenicity island protein

DNA sequence : 
ATGATGATAAAGAAAAAGGCTGCGTTTAGTGAATATCGTGATTTAGAGCAAAGTTACATGCAGCTAAATCACTGTCTTAA
AAAATTTCACCAAATCCGGGCTAAGGTGAGTCAACAGCTTGCTGAAAGGGCAGAGAGCCCCAAAAAGAGCAGAGAGACAG
AGAGTATTCTTCATAACCTATTTCCACAAGGCGTTGCCGGGGTTAACCAGGAGGCCGAGAAGGATTTAAAGAAAATAGTA
AGTTTGTTTAAACAACTTGAAGTACGACTGAAACAACTTAATGCTCAAGCCCCGGTGGAGATACCGTCAGGAAAAACAAA
AAGGTAA

Protein sequence : 
MMIKKKAAFSEYRDLEQSYMQLNHCLKKFHQIRAKVSQQLAERAESPKKSRETESILHNLFPQGVAGVNQEAEKDLKKIV
SLFKQLEVRLKQLNAQAPVEIPSGKTKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseA YP_216405.1 secretion system effector protein SseA Virulence SPI-2 Protein 3e-46 100
sseA NP_456131.1 putative pathogenicity island protein Virulence SPI-2 Protein 3e-46 100
sseA NP_805068.1 pathogenicity island protein Virulence SPI-2 Protein 3e-46 100
sseA AAC28878.1 SseA Virulence SPI-2 Protein 4e-46 99
sseA CAA12184.1 SseA Virulence SPI-2 Protein 4e-46 99
sseA NP_460362.1 secretion system chaperone protein Virulence SPI-2 Protein 6e-46 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSPA1354 YP_002142193.1 pathogenicity island protein VFG0498 Protein 2e-46 99