Gene Information

Name : SSPA1353 (SSPA1353)
Accession : YP_002142192.1
Strain : Salmonella enterica AKU12601
Genome accession: NC_011147
Putative virulence/resistance : Virulence
Product : pathogenicity island effector protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1522955 - 1523545 bp
Length : 591 bp
Strand : -
Note : similar to Salmonella typhi CT18 pathogenicity island effector effector protein

DNA sequence : 
ATGTCTTCAGGAAACATCTTATGGGGAAGTCAAAACCCTATTGTGTTTAAAAATAGCTTCGGCGTCAGCAACACTGATAC
CGGGGGGCAGGATGACTTATCCCAGCAAAATCCGTTTGCCGAAGGGTATGGTGTTTTGCTTATTCTCCTTATGGTTATTC
AGGCTATCGCAAATAATAAATTTATTGAAGTCCAGAAGAACGCTGAACGTGCCAGAAATACCCAGGAAAAGTCAAATGAG
ATGGATGAGGTGATTGCTAAAGCAGCCAAAGGGGATGCTAAAACCAAAGAGGAGGTGCCTGAGGATGTAATTAAATACAT
GCGTGATAATGGTATTCTCATCGATGGTATGACCATTGATGATTATATGGCTAAATATGGCGATCATGGGAAGCTGGATA
AAGGTGGCCTACAGGCGATCAAAGCGGCTTTGGATAATGACGCCAACCGGAATACCGATCTTATGAGTCAAGGGCAGATA
ACAATTCAAAAAATGTCTCAGGAGCTTAACGCTGTCCTTACCCAACTGACGGGGCTTATCAGTAAGTGGGGGGAAATTTC
CAGTATGATAGCGCAGAAAACGTATTCATGA

Protein sequence : 
MSSGNILWGSQNPIVFKNSFGVSNTDTGGQDDLSQQNPFAEGYGVLLILLMVIQAIANNKFIEVQKNAERARNTQEKSNE
MDEVIAKAAKGDAKTKEEVPEDVIKYMRDNGILIDGMTIDDYMAKYGDHGKLDKGGLQAIKAALDNDANRNTDLMSQGQI
TIQKMSQELNAVLTQLTGLISKWGEISSMIAQKTYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseB AAC28879.1 putative secreted protein Virulence SPI-2 Protein 2e-86 99
sseB CAA12185.1 SseB Virulence SPI-2 Protein 2e-86 99
sseB NP_456130.1 putative pathogenicity island effector effector protein Virulence SPI-2 Protein 3e-86 99
sseB NP_805069.1 pathogenicity island effector protein Virulence SPI-2 Protein 3e-86 99
sseB NP_460363.1 translocation machinery component Virulence SPI-2 Protein 3e-86 99
sseB YP_216406.1 secretion system effector protein SseB Virulence SPI-2 Protein 2e-86 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSPA1353 YP_002142192.1 pathogenicity island effector protein VFG0499 Protein 7e-87 99