Gene Information

Name : SSPA1346 (SSPA1346)
Accession : YP_002142185.1
Strain : Salmonella enterica AKU12601
Genome accession: NC_011147
Putative virulence/resistance : Virulence
Product : pathogenicity island effector protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1518036 - 1518725 bp
Length : 690 bp
Strand : -
Note : similar to Salmonella typhi CT18 pathogenicity island effector protein

DNA sequence : 
ATGAAACCTGTTAGCCCAAATGCTCAGGTAGGAGGGCAACGTCCTGTTAACGCGCCTGAGGAATCACCTCCATGTCCCTC
ATTGCCACATCCGGAAACCAATATGGAGAGTGGTAGAATTGGACCTCAACAAGGAAAAGAGCGGTTATTGGCCGGACTTG
CGAAACGAGTGATAGAGTGTTTTCCAAAAGAAATTTTTAGTTGGCAAACGGTCATTTTGGGCGGACAGATTTTATGCTGT
TCCGCTGGAATAGCATTAACAGTGCTAAGTGGTGGAGGCGCACCGCTCGTAGCCCTGGCAGGAATTGGCCTTGCTATTGC
CATCGCGGATGTCGCCTGTCTTATCTACCACCATAAACATCATTTGCCTATGGCTCACGACAGTATAGGCAATGCCGTTT
TTTATATTGCTAATTGTTTCGCCAATCAACGCAAAAGTATGGCGATTGCTAAAGCCGTCTCCCTGGGCGGTAGATTAGCC
TTAACCGCGACGGTAATGACGCATTCATACTGGAGTGGGAGTTTGGGACTACAGCCTCACTTATTAGAGCATCTTAATGA
TATTACCTACGGACTAATGAGTTTTACTCGCTTCGGTATGGATGGGATGGCAATGACCGGTATGCAGGTCAGCAGCCCAT
TATATCGTTTGCTGGCTCAGGTGACGCCAGAACAACGTGCGCCGGAGTAA

Protein sequence : 
MKPVSPNAQVGGQRPVNAPEESPPCPSLPHPETNMESGRIGPQQGKERLLAGLAKRVIECFPKEIFSWQTVILGGQILCC
SAGIALTVLSGGGAPLVALAGIGLAIAIADVACLIYHHKHHLPMAHDSIGNAVFYIANCFANQRKSMAIAKAVSLGGRLA
LTATVMTHSYWSGSLGLQPHLLEHLNDITYGLMSFTRFGMDGMAMTGMQVSSPLYRLLAQVTPEQRAPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseG NP_460370.1 secreted effector protein Virulence SPI-2 Protein 4e-93 99
sseG YP_216413.1 secretion system effector protein SseG Virulence SPI-2 Protein 4e-93 99
sseG NP_456123.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 3e-93 99
sseG NP_805076.1 pathogenicity island effector protein Virulence SPI-2 Protein 3e-93 99
sseG AAC28873.1 SseG Virulence SPI-2 Protein 3e-93 99
sseG CAA12192.1 SseG Virulence SPI-2 Protein 3e-93 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSPA1346 YP_002142185.1 pathogenicity island effector protein VFG0506 Protein 2e-93 99