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Name : SSPA1330 (SSPA1330) Accession : YP_002142169.1 Strain : Salmonella enterica AKU12601 Genome accession: NC_011147 Putative virulence/resistance : Virulence Product : type III secretion protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4791 EC number : - Position : 1507045 - 1507824 bp Length : 780 bp Strand : - Note : similar to Salmonella typhi CT18 type III secretion protein DNA sequence : ATGGCACAACAGGTAAATGAGTGGCTTATTGCATTGGCTGTGGCTTTTATTCGACCATTGAGCCTCTCTTTATTACTTCC CCTATTAAAAAGTGGCAGTTTAGGGTCCGCGATTTTACGTAATGGCGTGCTTATGTCACTTACCTTTCCCATATTACCAA TCATTTACCAGCAGAAGATTATGATGCATATTGGTAAAGATTACAGCTGGTTAGGGTTAGTCACCGGAGAGGTGATTATT GGTTTTTTAATTGGGTTTTGTGCGGCGGTTCCCTTTTGGGCCGTTGATATGGCGGGGTTTCTGCTTGATACTTTACGTGG CGCGACAATGGGTACGATATTCAATTCTACAATGGAAGCTGAAACCTCACTTTTTGGCTTGCTTTTCAGCCAATTTTTGT GTGTTATTTTCTTTATAAGCGGCGGCGTGGAGTTTATATTAAACATTCTGTATGAGTCATACCAATATTTACCGCCAGGG CGTACTTTATTATTTGATCGGCAATTTTTAAAATATATCCAGGCAGAGTGGAGAACGCTTTATCAATTATGCATCAGCTT CTCTCTTCCTGCCATAATATGTATGGTATTAGCCGATCTGGCTTTAGGTCTTTTAAATCGGTCGGCACAACAATTGAATG TGTTTTTCTTCTCAATGCCGCTCAAAAGTATATTAGTTCTACTAACGCTCCTGATCTCATTCCCTTATGCTCTTCATCAC TATTTGGTTGAAAGCGATAAGTTTTATATTTATCTAAAAGACTGGTTTCCATCTGTATGA Protein sequence : MAQQVNEWLIALAVAFIRPLSLSLLLPLLKSGSLGSAILRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVII GFLIGFCAAVPFWAVDMAGFLLDTLRGATMGTIFNSTMEAETSLFGLLFSQFLCVIFFISGGVEFILNILYESYQYLPPG RTLLFDRQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFSMPLKSILVLLTLLISFPYALHH YLVESDKFYIYLKDWFPSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaT | NP_456107.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 4e-100 | 99 |
| ssaT | NP_805092.1 | type III secretion protein | Virulence | SPI-2 | Protein | 4e-100 | 99 |
| ssaT | NP_460386.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 1e-98 | 98 |
| ssaT | YP_216429.1 | secretion system apparatus protein SsaT | Virulence | SPI-2 | Protein | 9e-99 | 98 |
| ssaT | CAA68201.1 | secretion system apparatus, SsaT | Virulence | SPI-2 | Protein | 9e-99 | 98 |
| YPO0272 | YP_002345354.1 | type III secretion apparatus protein | Virulence | Not named | Protein | 8e-46 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SSPA1330 | YP_002142169.1 | type III secretion protein | VFG0521 | Protein | 5e-99 | 98 |
