Gene Information

Name : SSPA1241 (SSPA1241)
Accession : YP_002142080.1
Strain : Salmonella enterica AKU12601
Genome accession: NC_011147
Putative virulence/resistance : Resistance
Product : DNA-binding transcriptional activator MarA
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 1414560 - 1414994 bp
Length : 435 bp
Strand : +
Note : 'transcriptional activator of genes involved in the multiple antibiotic resistance (Mar) phenotype; also activates sodA, zwf and micF'

DNA sequence : 
TTGAGTATTTGCTCAAGAAAATTCTGCCGTAGACAAAAAAGAGGTATGACGATGTCCAGACGCAACACTGACGCTATTAC
TATTCATAGCATTTTGGACTGGATCGAGGATAACCTGGAGTCGCCGCTCTCACTGGAAAAAGTGTCTGAGCGTTCAGGAT
ATTCCAAATGGCACCTGCAACGGATGTTTAAAAAAGAGACCGGTCATTCATTAGGTCAATACATCCGCAGCCGTAAGATG
ACGGAAATCGCGCAAAAATTAAAAGAGAGCAACGAGCCCATTCTCTATCTGGCGGAACGCTATGGCTTTGAGTCACAGCA
AACATTGACCCGGACGTTCAAAAACTATTTTGATGTGCCGCCACACAAATACCGGATCACCAATATGCATGGCGAATCAC
GGTATATGCTGCCGCTGAACCATGGCAACTACTAG

Protein sequence : 
MSICSRKFCRRQKRGMTMSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKM
TEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRITNMHGESRYMLPLNHGNY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 6e-21 43
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 6e-21 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSPA1241 YP_002142080.1 DNA-binding transcriptional activator MarA CP001138.1.gene1637. Protein 5e-57 100
SSPA1241 YP_002142080.1 DNA-binding transcriptional activator MarA CP000034.1.gene1596. Protein 3e-54 96
SSPA1241 YP_002142080.1 DNA-binding transcriptional activator MarA NC_002695.1.917339.p Protein 2e-53 96
SSPA1241 YP_002142080.1 DNA-binding transcriptional activator MarA BAC0560 Protein 2e-53 96
SSPA1241 YP_002142080.1 DNA-binding transcriptional activator MarA CP001918.1.gene2033. Protein 4e-52 95
SSPA1241 YP_002142080.1 DNA-binding transcriptional activator MarA CP000647.1.gene1624. Protein 7e-52 93
SSPA1241 YP_002142080.1 DNA-binding transcriptional activator MarA NC_010558.1.6276025. Protein 3e-21 43
SSPA1241 YP_002142080.1 DNA-binding transcriptional activator MarA CP001138.1.gene612.p Protein 1e-22 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSPA1241 YP_002142080.1 DNA-binding transcriptional activator MarA VFG1038 Protein 2e-21 43