Gene Information

Name : ldcA (SSPA1002)
Accession : YP_002141843.1
Strain : Salmonella enterica AKU12601
Genome accession: NC_011147
Putative virulence/resistance : Unknown
Product : L,D-carboxypeptidase A
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1619
EC number : -
Position : 1136442 - 1137356 bp
Length : 915 bp
Strand : -
Note : catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine

DNA sequence :
ATGTCTCTGTTTCATTTAATCGCCCCCTCGGGCTACTGTATTAACCAACAGGCCGCGTTACGCGGCGTTCAGCGCCTGAC
TGACGCGGGTCATCAGGTGGAGAATGACGAGGTGATTCGTCGCCGCTATCAGCGTTTTGCCGGTACGGACGCGGAACGGC
TGGCCGATGTTAATTCGCTGGCCTCGCTAACTTCGCCGGATACGATCGTCATGCCGGTTCGCGGCGGCTATGGCGCCAGC
CGCTTGCTGGATCGTATCGACTGGCAGGCGCTCGCCTCCCGGCAACAGCGCGATCCCTTACTGATTTGCGGTCATAGCGA
TTTTACGGCGATTCAGGCTGGACTCCTGGCGCAGGCCAATGTCATCACCTTTAGCGGTCCTATGCTGGCGGCAAATTTTG
GCGCCGAAACGCTGAATACGTTCACCGAGCAACATTTCTGGCTGGCGCTACGCAAGGCGCAATTTACCGTAGAGTGGCAA
GGCGACGGCCCTCAGTGCGACGTACAAGGCACCTTATGGGGCGGAAATCTGGCGATGTTGATTTCCCTTATCGGTACGCC
CTGGATGCCGACTATCGATAAAGGAATTTTAGTGCTGGAAGATGTCAATGAGCATCCTTTCCGGGTGGAGCGTATGCTTT
TGCAACTGGAGTACGCCGGAATTTTAAACCGCCAGAGCGCCATCGTTCTCGGCAGCTTTAGCGGCGCGGCGCCCAACGAG
TATGACGCCGGCTATTCTCTGGAGAGCGTCTACGCGTTTTTACGTTCCCGTCTGTCCGTTCCGCTGATTACCGGTCTCGA
CTTCGGGCATGAACAGCGTACGGTAACGCTCCCTATCGGGGCAAACGCGACGCTTAAAAATACGCGCCAGGGGACTCAAC
TCACTTTATCTGGTCATCCTACGCTGCAATTGTAA

Protein sequence :
MSLFHLIAPSGYCINQQAALRGVQRLTDAGHQVENDEVIRRRYQRFAGTDAERLADVNSLASLTSPDTIVMPVRGGYGAS
RLLDRIDWQALASRQQRDPLLICGHSDFTAIQAGLLAQANVITFSGPMLAANFGAETLNTFTEQHFWLALRKAQFTVEWQ
GDGPQCDVQGTLWGGNLAMLISLIGTPWMPTIDKGILVLEDVNEHPFRVERMLLQLEYAGILNRQSAIVLGSFSGAAPNE
YDAGYSLESVYAFLRSRLSVPLITGLDFGHEQRTVTLPIGANATLKNTRQGTQLTLSGHPTLQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
f304 AAC61707.1 F304 Not tested PAI I CFT073 Protein 4e-122 80