Gene Information

Name : Gbem_0640 (Gbem_0640)
Accession : YP_002137464.1
Strain : Geobacter bemidjiensis Bem
Genome accession: NC_011146
Putative virulence/resistance : Resistance
Product : dihydrolipoamide dehydrogenase-like protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1249
EC number : -
Position : 759821 - 761227 bp
Length : 1407 bp
Strand : -
Note : -

DNA sequence :
ATGAACCAGCAACCCGAAATCATCATCATAGGCTCCGGCTCCACCGCCTTTGCCGCAGCGCTCAGGGCGCAGGAGCGGGG
TGCAGCCTCCATCATGATCGAGCGAAGCGCCCTCGGCGGGACCTGCATCAACTGGGGGTGCATCCCCAGCAAGACCCTGA
TCCACGCGGCGCTCTTCCGGCACGAGGCGACGCTTGGCGAGCGGCTCGGGCTGGGGGCGCTGAGCCAGGCGCTCGACTTC
CCGCTTTTGGACTCCCACAAGCTGGACGTGGTGCAAAGGCTGAGAACGACCAAGTACCTGGACGTGCTCAAAAACGTCCC
GGGGCTCACCCTGGTCAAGGGGATGGCGGTCTTCACCTCCCCGGACACCGTCCGGGTCGGGGAGCGGCGCCTCACCGGGA
GCCGGTTCCTCATCGCCGCCGGGGGCGTCCCCCGCGTCCCCCCCATCGCAGGACTCGACGAGACCCCCTTCCTGACCAGC
AAGAGCGCGCTGATGCTGAAAAAAATCCCCGTATCGCTCACCATCATCGGCGGCGGCGTCATCGCCCTGGAACTGGGACA
GATGTTCCTTAGGCTGGGGGTAAAGGTAACCGTCCTTGAGCACGGGCAGAGGGTGCTTCCGGCGATCGAGGCGGAGCCCG
CCCTGGCGCTGCAGGACGTCCTCGCCTCCGAGGGGATGCGCATCATCCTGAACGCCTCGGTGCTGAGCGCCTGCCGGCAT
GGCGACGGCGTGAGGGTCGAGGCGCTGGTCGGGGGGGAACGCACCTGCCTTGATTCGCAGCAGCTCCTCGTGGCCGTCGG
CACCGCCCCCGCCACCGAAGGGCTTGGCCTGGAGCAGGCCGGGGTGCAGGTGGACCAAAGGGGGTTCATCGTGGTGGACG
AGCAGATGCGCACCTCCTCCCCCGGGATCTGGGCCGCAGGCGACGTCACCGGCCGGATGCAGATCGCCACCGTCGGCGCC
CGCGAGGGGATCGCCGCCGTGGACAACATGCTGGAGACCGGCTGCAACTGCGCCCTCGACTACCAGACCCTCCCTATGGC
CATCTTCACCGACCCGGAGGTCGGAACCGTCGGCTACACAGAAGAGGGAGCGCGCCGGGCCGGGTTCGAGGTAGAAAGCC
ACACCATCCCCGCCTCCGCCATCGCAAAGGCGCACGTCACCGGGGCGCTCGCCGGCGCCGTCAAGATCGTCGCCGAGACA
GGAACCGGAAGGATTCTGGGCGTGCACCTCTGCCTGCACCGCGGGGCCGACATCATCAACGAGGCCGCACTCGCCATCCG
TTGCCGCATGACCGTGGCGGAGCTTGCCGACACCCTCCACGTCTACCCCTCGATGGGTGAAGGGTTGCGGCTCTGCGCCC
AGGCCTTTAGCAGAAACCTGGACCATCTCTCCTGCTGCGCCGAATAG

Protein sequence :
MNQQPEIIIIGSGSTAFAAALRAQERGAASIMIERSALGGTCINWGCIPSKTLIHAALFRHEATLGERLGLGALSQALDF
PLLDSHKLDVVQRLRTTKYLDVLKNVPGLTLVKGMAVFTSPDTVRVGERRLTGSRFLIAAGGVPRVPPIAGLDETPFLTS
KSALMLKKIPVSLTIIGGGVIALELGQMFLRLGVKVTVLEHGQRVLPAIEAEPALALQDVLASEGMRIILNASVLSACRH
GDGVRVEALVGGERTCLDSQQLLVAVGTAPATEGLGLEQAGVQVDQRGFIVVDEQMRTSSPGIWAAGDVTGRMQIATVGA
REGIAAVDNMLETGCNCALDYQTLPMAIFTDPEVGTVGYTEEGARRAGFEVESHTIPASAIAKAHVTGALAGAVKIVAET
GTGRILGVHLCLHRGADIINEAALAIRCRMTVAELADTLHVYPSMGEGLRLCAQAFSRNLDHLSCCAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13401.1 mercuric reductase Not tested PAGI-5 Protein 1e-64 43
merA ABQ57371.1 MerA Not tested SGI1 Protein 5e-64 42
merA AGK07021.1 MerA Not tested SGI1 Protein 5e-64 42
merA AGK07079.1 MerA Not tested SGI1 Protein 5e-64 42
merA ACN81005.1 MerA Hg(II) mercuric ion reductase Not tested AbaR5 Protein 8e-62 41
merA CAJ77060.1 Mercuric ion reductase Not tested AbaR1 Protein 8e-62 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gbem_0640 YP_002137464.1 dihydrolipoamide dehydrogenase-like protein BAC0653 Protein 2e-64 41
Gbem_0640 YP_002137464.1 dihydrolipoamide dehydrogenase-like protein BAC0652 Protein 2e-65 41