|
Name : gspE (Gbem_0594) Accession : YP_002137418.1 Strain : Geobacter bemidjiensis Bem Genome accession: NC_011146 Putative virulence/resistance : Virulence Product : type II secretion system ATPase GspE Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 712164 - 713726 bp Length : 1563 bp Strand : - Note : - DNA sequence : ATGGCAGAAAGCTTAGACATAGAAGAAATAGCGACACGGCTCGGCCTTCCCTACCAGGCCGAGATCGACGACTCCAAGGT AGACGGGGCGCTGGTGAACCGGGTCCCGCTCAACTTCGCTCGCAACAACCTGCTGCTCCCGCTGCACGAGGAGGACGGCT CCATCGTCGCCGCCAGCGCCGATCCGGCGAACCTCCTGGCGCTGGACGAGATGGCCGGGCTTTTCTCGCAGCCGGTCTCC GTGGTCGCAGTCCCGCGCCCGGCTCTTCTGGATGCGGTGAACCGCCTCTACTCCCGCCTCTCCGGCTCCGCCCAGGAGGT GGTCGAGGAACTCGAAGGGGAAGAGCTCTCCACCCTCGCCACCACCTTCAACGAACCGCGCGACCTGATGGAGCTGACCG ACGAGGCGCCGGTGATCCGGCTTCTGAACTCGATCCTGTTCCAGGCGGTTAAGGAGCGCGCGAGCGACATCCACATCGAG CCCTTCGAGCGCGAGCTCGAGGTCCGCTTCCGGATCGACGGCCTTTTGTACAAGATGCTCTCCCCCCCCAAGGTGATCCA GGAGGCGCTCACCTCCCGCGTCAAGATCATGTCCGGGCTCAACATCGCCGAGAAGAGGCTGCCGCAGGACGGGCGCATCA GGGTCAAGGTGGCCGGGCGCGACGTCGACATACGCGTCTCGCTCATCCCCACCTTCTTCGGGGAGCGCGTGGTATTGAGG CTTTTGGACAAGCAGCGCGGCGTCCTCTCACTCAAAGAGATCGGCCTCTCCGACGGCAACGACCGGCTGATGGACCGGCT CTTGTCGAGAACCAGCGGCATCATCCTGGTGACGGGACCTACCGGCAGCGGCAAGACCACAACGCTCTACGCGGCCCTCT CCCAGATCAACTCGCCGGAGAAGAACATCATCACCGTCGAGGACCCGATCGAGTACCAGTTGAAGGGTGTGGGGCAGATC CAAGTCAACCCGAAGATCGAACTCACCTTCGCCGCGGGGCTTCGCTCCATCCTCAGGCAGGACCCGGACATCGTCATGAT CGGCGAGATCCGCGACGCCGAGACCGCCGAGATCGCCATGCAGGCCTCGCTCACCGGCCACCTGGTCCTCTCGACGCTGC ACACAAACGACGCCGCCACCGCGGTGACCCGCCTGATCGACATGGGGATCGAGCCGTTCATGGTCGCCTCTTCGCTCTCC GCGGTACTCGCGCAGCGGCTGGTCCGCGTCATCTGCCCGCACTGCAAGGAATCCTATGTCCCGGACAGAAGCTACCCCGG CGTCGAACTCCCGCCGCTTCTGTACCGCGGCCGCGGCTGCGAGAAGTGCTTCAACCTTGGGACCATCGGGCGGGTCGGCA TCTACGAACTTCTCCCCATCGACGCCGAACTCTGCTCCATGATCATCCGGCAGGCCTCCTCCGGCGCCATCAAGGAATAC GCCGTCTCCAAGGGGATGCGCACCCTGCGCGAGGACGGCCTCGCCAAGGCAGCCCAGGGGATCACCACCATCGAGGAGGT CCTGAGGGTGACTCAGGACGACTATGCCGACCTTTCGCTATAG Protein sequence : MAESLDIEEIATRLGLPYQAEIDDSKVDGALVNRVPLNFARNNLLLPLHEEDGSIVAASADPANLLALDEMAGLFSQPVS VVAVPRPALLDAVNRLYSRLSGSAQEVVEELEGEELSTLATTFNEPRDLMELTDEAPVIRLLNSILFQAVKERASDIHIE PFERELEVRFRIDGLLYKMLSPPKVIQEALTSRVKIMSGLNIAEKRLPQDGRIRVKVAGRDVDIRVSLIPTFFGERVVLR LLDKQRGVLSLKEIGLSDGNDRLMDRLLSRTSGIILVTGPTGSGKTTTLYAALSQINSPEKNIITVEDPIEYQLKGVGQI QVNPKIELTFAAGLRSILRQDPDIVMIGEIRDAETAEIAMQASLTGHLVLSTLHTNDAATAVTRLIDMGIEPFMVASSLS AVLAQRLVRVICPHCKESYVPDRSYPGVELPPLLYRGRGCEKCFNLGTIGRVGIYELLPIDAELCSMIIRQASSGAIKEY AVSKGMRTLREDGLAKAAQGITTIEEVLRVTQDDYADLSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-98 | 53 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-98 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_002137418.1 | type II secretion system ATPase GspE | VFG0182 | Protein | 3e-109 | 58 |
| gspE | YP_002137418.1 | type II secretion system ATPase GspE | VFG2048 | Protein | 7e-99 | 53 |
| gspE | YP_002137418.1 | type II secretion system ATPase GspE | VFG1876 | Protein | 2e-94 | 45 |
| gspE | YP_002137418.1 | type II secretion system ATPase GspE | VFG0233 | Protein | 1e-80 | 45 |
| gspE | YP_002137418.1 | type II secretion system ATPase GspE | VFG2426 | Protein | 2e-76 | 43 |
