Gene Information

Name : Gbem_3230 (Gbem_3230)
Accession : YP_002140025.1
Strain : Geobacter bemidjiensis Bem
Genome accession: NC_011146
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1683
EC number : -
Position : 3719399 - 3720349 bp
Length : 951 bp
Strand : -
Note : -

DNA sequence : 
ATGACTTCACCTATAAAGATCGGTGTGAGTTCGTGCCTTCTGGGTGAGAAGGTCCGCTATGACGGAGGGCACAAGCATGA
CCGCTACATCACGGACGTGCTGGGCAGGTTCTTCCTCTTCGTCCCGGTCTGTCCGGAGGTGGAGTGCGGCATGCCCGTGC
CGCGCGAGGCGATGCGGCTGGAGGGGGATCCTGCGGCGCCCAGGCTTTTCACCCACAAGAGCCGGGCGGACAAGACCGAG
CAGATGCTGGCCTTTTGCCGGGCCAAGGTGGAGGCGTTGGCCTTGGAGGATCTCTGCGGCTTCATCTTCAAGAAGGGCTC
CCCCAGTTCCGGCCTGTTCCGGGTCAAGGTCTACGACCAAGCCGGCGTGCCGTCGAAGACCGGCAGCGGCCTTTTCGCGG
CCGCCGTGGCCAGGCGTTTCCCGCACCTTCCCATGGAAGAGGAGGGGAGGCTCGCCGACGCCTTTTTGCGGGAGAACTTC
ATCGAGCGGGTCTTCAGCTACCGGCGCTGGAAGGACTTCCTGGCGCAGGGACCGGACCTGGGGAAGCTGGTGCAGTTCCA
TACCCGGCAAAAGCTATTGGTCATGTCCCACAGCACGCAGCTCTACCGCGAAATGGGGGCGCTTGTCGCGCGCGGCAAGG
AGATCGCCTGGCCGGAACTCGCGGAGCGCTACCAGGAGCTTTTCCTGCGGGCCTTGGAGCTGCAGGCCACGGTGAAGAAG
CAGACCAACGTGCTGATGCACATCATGGGGTACTTCAAAAAAGAGCTGGGGGCCGAGGAAAAACAGGAGCTTTTGGAGTT
GATCGGGCAGTACCACGACGGCCTGGTCCCCCTGGTGGTGCCGGTCACCCTCCTGAGGCACTACGTCAACAAGTACCGGC
AGCAGTATCTGCAGCAGCAGGTTTACCTCTCCCCCCATCCGGCGGAGCTGATGCTGCGCAACCACGCTTAA

Protein sequence : 
MTSPIKIGVSSCLLGEKVRYDGGHKHDRYITDVLGRFFLFVPVCPEVECGMPVPREAMRLEGDPAAPRLFTHKSRADKTE
QMLAFCRAKVEALALEDLCGFIFKKGSPSSGLFRVKVYDQAGVPSKTGSGLFAAAVARRFPHLPMEEEGRLADAFLRENF
IERVFSYRRWKDFLAQGPDLGKLVQFHTRQKLLVMSHSTQLYREMGALVARGKEIAWPELAERYQELFLRALELQATVKK
QTNVLMHIMGYFKKELGAEEKQELLELIGQYHDGLVPLVVPVTLLRHYVNKYRQQYLQQQVYLSPHPAELMLRNHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 1e-46 42
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 1e-46 42
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 1e-46 42
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 1e-46 42
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 8e-47 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gbem_3230 YP_002140025.1 hypothetical protein VFG0490 Protein 4e-47 42