Gene Information

Name : glnA-1 (Gbem_3077)
Accession : YP_002139875.1
Strain : Geobacter bemidjiensis Bem
Genome accession: NC_011146
Putative virulence/resistance : Virulence
Product : type I glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 3559987 - 3561399 bp
Length : 1413 bp
Strand : -
Note : -

DNA sequence :
ATGACACCTAAACAAGTAGTGGAGTTTGCCAAAGAAAACGGCGTACTTATGGTCGATTTCAAATTCATGGACTTCGTCGG
CATCTGGCAGCACTTCACCGTGCCGATGAGCGAGTTCGGCGAGGACACCTTCGAGGAAGGGCAGGGCTTTGACGGCTCCT
CCATCCGTGGGTGGCAGCCGATTCACGCCTCCGACATGATCATCATTCCGGACCCGAAGACCGCGAAGATGGACCCGTTC
ACCGCGATTCCCACTCTTTCGCTTATCTGCGACATCTTCGACCCGATCACCAAAGAAGACTACACCCGCGACCCGCGTAA
CATCGCCAAGAAAGCCGAGAACTACCTGAAGTCGACCGGCCTTGCCGACACCGCATACTTCGGGCCGGAAGCTGAATTCT
TCATCTTCGACGACGTCCGTTACGACTCCACCGCCAACTCCTCCTTCTACGCCGTCGACTCCGTCGAAGGCGCATGGAAC
AGCGGCCGCGAAGAGTTCCCGAACCTCGGCTACAAGCCGCGCCACAAGGAAGGCTACTTCCCGGTTGCCCCGACCGACTC
ACAGAACGACCTCCGCAATGAGATGGTCCTGGAACTGCAGAAAGTCGGCATCCGCGTCGAGTGCCAGCACCACGAGGTCG
CTACCGGCGGCCAGGCCGAGATCGACATGCGCTTCTCCTCCCTGGTCGACATGGCTGACCAACTCCAGTGGTTCAAGTAC
GTCATCAAGAACGTGGCCAACAGGAACGGCAAGACCGTAACCTTCATGCCCAAGCCGCTTTACGGCGACAACGGCTCCGG
TATGCACTGCCACATGTCCCTCTGGAAAGAAGGCACCAACCTCTTCGCCGGCGACAAATACGGCGGGCTTTCCCAGATGG
CTCTCTGGTACATCGGCGGCATCATCAAGCACGCCCGTGCCCTCTGCGCCTTCACCAACCCGACCACCAACTCCTACAAG
CGTCTGGTGCCGGGCTTCGAGGCTCCGGTGAACATGGCTTACTCCAGCCGTAACCGTTCCGCTTCGCTCCGTATCCCGAT
GTTCTCCTCGAACCCCAAGGCGAAGAGGATCGAATACCGCACTCCGGACCCGTCCTGCAACGGCTACCTCGCCTTCGCAG
CCCTGCTGATGGCTGGCCTCGACGGCATCGAGAACAAGATCGATCCGGGCCAGCCGCTGGACAAGGACATCTACGGCCTG
TCCCCGGAAGAACTCGCCACCATCCCGTCCGCACCGGGCTCCCTCGAGGAGGCTCTCAAGGCGCTGCAGGAAGACAACGA
GTTCCTCTACAAAGGTGACGTCTTCACTCCGGACGTCGTCGAGAAGTGGATCGAGTACAAGACCGAAGCCGAAGTCAACC
CGGTCCGTATGCGTCCGGTACCGCTCGAGTTCGCACTGTACTTCGACATTTAA

Protein sequence :
MTPKQVVEFAKENGVLMVDFKFMDFVGIWQHFTVPMSEFGEDTFEEGQGFDGSSIRGWQPIHASDMIIIPDPKTAKMDPF
TAIPTLSLICDIFDPITKEDYTRDPRNIAKKAENYLKSTGLADTAYFGPEAEFFIFDDVRYDSTANSSFYAVDSVEGAWN
SGREEFPNLGYKPRHKEGYFPVAPTDSQNDLRNEMVLELQKVGIRVECQHHEVATGGQAEIDMRFSSLVDMADQLQWFKY
VIKNVANRNGKTVTFMPKPLYGDNGSGMHCHMSLWKEGTNLFAGDKYGGLSQMALWYIGGIIKHARALCAFTNPTTNSYK
RLVPGFEAPVNMAYSSRNRSASLRIPMFSSNPKAKRIEYRTPDPSCNGYLAFAALLMAGLDGIENKIDPGQPLDKDIYGL
SPEELATIPSAPGSLEEALKALQEDNEFLYKGDVFTPDVVEKWIEYKTEAEVNPVRMRPVPLEFALYFDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 7e-102 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA-1 YP_002139875.1 type I glutamine synthetase VFG1399 Protein 5e-132 59