Gene Information

Name : apl-4 (Gbem_2840)
Accession : YP_002139640.1
Strain : Geobacter bemidjiensis Bem
Genome accession: NC_011146
Putative virulence/resistance : Resistance
Product : sodium/solute symporter family protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 3268932 - 3270917 bp
Length : 1986 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAAAAGAATCGCCGCCATAACGCTCGCTCTTACGTTCTCCGTTTGCGCCGCCGCTCCCCTCGCAGTCGCAGCCTC
GGTCGGCACCGCCGCACCGCAGTCACCGGCAATAGCAGCGCCTGCGGCAACAGTTGCACCTGCAGCCGCCACCGCGGCAG
CGCCCACCGCAGCCAAGGCCGCTCCGGCCAAGGGCGCGGACACCCAGCCCGCCAAGGTGACCCCCAACCGCGGCATCACC
ATCGGCATGTTCGCGCTCATCATCGCCATCACCATGGGGGTGGTGGTCTGGGCCGCGAAGAAGACGCAGACCGCCGCCGA
CTTCTACACCGCAGGCGGAGGGATCACCGGCCTCCAAAACGGCTGGGCCATAGCCGGCGACTACATGTCGGCCGCCTCTT
TCCTCGGCATGTCGGGGCTCATCTCGCTCTACGGCATCGACGGCTTCATGTACGCGGTGGGGCCGATGTTCTCGTTCATC
GCCATCCTGCTGGTCATCGCCGAGCCCTGCCGCAACGCCGGCAAGTACACGCTGGGCGACATCCTCTCCTTCAGGTCGTC
GCCCAAGGTGGTGCGCGGCGTAGCGGCGCTCTCCACCGTCACCGTCTCGATCTTCTACCTGATCGCGCAGATGGTCGGCG
CGGGGAAGCTGATGCAGATGCTGATCGGGATCCCTTACCGCGTCTCGGTCATCGGGGTCGGGGCCCTCATGGTCGCCTAC
GTCGTCTTCGGCGGCATGAAAGCCACTACCTGGGTCCAGATCATCAAGGCCTCGCTCTTGATGGGCGCCACCACGCTTTT
GTGCATCCTGGTCGCGGCGAAGGCGGGCTTCAACCCGGTCTCCTTCTTCACCGACATCGTGAACAACCCGGCCATCCAGG
ATCACGTCAGGCTGAACGTACTGAAGGACGCCATTCCCAAGGCGGGGGTGGATTACGGCCAGCGCTTCCTGGAGCCCGGG
CTCTTCCTGAAAAGCCCGCTGGATCAGATCTCGCTCGGTATCGCCTGGGCGCTTGGCGCAGCCGGCCTGCCGCACATCCT
GATGCGCTTTTTCACGGTTCCCAGCGCCAAGGAAGCGCGCAAGTCGATCATCATCGCCCTTTTCCTTAACTCCACCTTCT
TCTTCATGATCAGCATCATCGGCTTCGGCGCAGCGCTCTACCTGACCCCCCAGGGCATCCTGGCGGTGGACAAAGGTGGG
AACATGGCGACGCTCTTATTGGCACAGCACATGGGTGGGGGCGCCGGGAGCCTCGGCGGAGACGTCTTCCTGGCCTTCAT
CTGCGCCGTAGCCTTCGCCACTATCCTCGCCGTCGTCTCCGGTCTCGTGCTCGCAGCCTCCGCGGCCATCGCCCACGACG
TCTATGTCAACATCATCAAGGACGGCAAGGCCGACCAGCACCTGCAGGTGAAGGTGGCGCGCATCACCTCCCTTTTCGTC
GGCACCTCCGCCATCCTGATGGGGCTTGCCGCCGAGAAGGAGAACGTGGTCGCCCTGGTGGCGCTCGCCTTCGCGGTCGC
CGCCTCGGGGAACTTCCCGGTGGTCATGCTCTCGCTCTTCTGGAAGAAGTTCAACACCGCGGGGATCGTTTCCGGCCTCG
TGGTCGGGACCGTCACCGCCCTCGCGCTGGTGATGGTGTCGCCGGTGATGACCTATCCCAAGAAGGTCGCGGCCGACGCG
AAGAAGATCGTCGAGACCCTGGAAAAGAAGCAGGCAACGGGCGTGGCGCTGGCGGACAAGGAGCTGAAGACCCTGGAGAA
GTCCCGGGTGGAATATGAGAAGAACAAGGATGGCAGCTCCATGGTCGGGCTCGATAAGCCGATATTCCCGCTGAAGAACC
CGGGTATCGTCTCGGTGCCCCTCGGGTTCCTGGCCGCCGTATTTGGTTGCCTCTTGTTCCGCGACCGCCGCGCCGAAGAC
ATGTTCGCCGAGATCGACGTGCGGCAGAACACCGGCCTCGGGATAGCCAAGGCGACAGATCACTAG

Protein sequence :
MKKRIAAITLALTFSVCAAAPLAVAASVGTAAPQSPAIAAPAATVAPAAATAAAPTAAKAAPAKGADTQPAKVTPNRGIT
IGMFALIIAITMGVVVWAAKKTQTAADFYTAGGGITGLQNGWAIAGDYMSAASFLGMSGLISLYGIDGFMYAVGPMFSFI
AILLVIAEPCRNAGKYTLGDILSFRSSPKVVRGVAALSTVTVSIFYLIAQMVGAGKLMQMLIGIPYRVSVIGVGALMVAY
VVFGGMKATTWVQIIKASLLMGATTLLCILVAAKAGFNPVSFFTDIVNNPAIQDHVRLNVLKDAIPKAGVDYGQRFLEPG
LFLKSPLDQISLGIAWALGAAGLPHILMRFFTVPSAKEARKSIIIALFLNSTFFFMISIIGFGAALYLTPQGILAVDKGG
NMATLLLAQHMGGGAGSLGGDVFLAFICAVAFATILAVVSGLVLAASAAIAHDVYVNIIKDGKADQHLQVKVARITSLFV
GTSAILMGLAAEKENVVALVALAFAVAASGNFPVVMLSLFWKKFNTAGIVSGLVVGTVTALALVMVSPVMTYPKKVAADA
KKIVETLEKKQATGVALADKELKTLEKSRVEYEKNKDGSSMVGLDKPIFPLKNPGIVSVPLGFLAAVFGCLLFRDRRAED
MFAEIDVRQNTGLGIAKATDH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 6e-58 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
apl-4 YP_002139640.1 sodium/solute symporter family protein BAC0570 Protein 2e-72 48