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Name : dnaB-1 (Gbem_2801) Accession : YP_002139601.1 Strain : Geobacter bemidjiensis Bem Genome accession: NC_011146 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 3229869 - 3231218 bp Length : 1350 bp Strand : + Note : - DNA sequence : ATGAACGCAACGGACATGAGAAAGCTGCCACCGCAGAGCATTGAGGCGGAGATGTCCATCCTGGGCGGGATCCTGGTGGA TAACGAGGCGATCAACCGCGTCCTCGAAATCCTGGTGCCGGACGATATGTACCGGGAAAGCCACAGGAAGATCCTGCGCG CCATGATCGATTTGAACGAGCGCGGGGAGCCTTGCGACCTGATCACCATGACCACCATCCTCAAGAAAAAAGGTGAGCTG GAAGAGGTCGGCGGCGGGGCCTACCTGGCGACACTGGTCGACTTCGTCCCCATGGCCGCGAACATCTCCTACTACTGCAA GATCGTGAAGGAGAAGTGGCTCACCAGGAAGCTCATCTCGGCGGCAACCGACATCGTGAGCAAGGGGTTCGAGGACAAGA TCGATACCGAGGAACTCCTCGACGCAGCCCAGAAGGTGATCTTCGAGATCTCGGAGAACAAGATCCGCCCCGCCTACTAC CAGGTGAGCGACATCCTCAAGGACACCATCAAGAACATCGAGCTCCTCTACGAGAAAAAGGAGCTGGTGACCGGCGTCCC CACGGGCTACACGGACCTGGACAAGCTGACGGCCGGTTTTCACGCCGGCGACCTGGTCATCATCGCTGGACGCCCGGCAA TGGGAAAGACCACCTTCGCCCTGAACGTGGCCCAGTACGCGGCCATCGACGCCGACAAAGCCTACCCCGCCGCCGTCTTT TCCCTGGAGATGCCCAAGGAGCAGCTGGTGGAGAGGCTCCTTTGCTCCGTGGCGAAGGTCGACCTGAGCCGACTGCGAAG CGGTCACCTGGTGGAGAACGACTGGCCCAAGCTGATCAAGGCCGGCGGCAAACTGCACGACGCGAAGATCTTCATCGACG ACACCCCGTCGATCACCATCATGGAGCTCCGCTCCAAGGCGAGGCGCCTGAAGGCCGAGCACAACATCGGCCTCATCGTC ATCGACTACCTGCAGCTCATGCGCGGCGGCGCCAACCCCGAAAGCCGCCAGCAGGAGATCTCGGAAATCTCCCGTTCGCT CAAGGGTCTGGCCAAGGAGTTGAGCATTCCGGTCATCGCCCTGTCGCAGCTCAACCGCGGATTGGAGCAGCGCTCCGACA AGCGCCCGATGATGAGCGACTTGAGGGAATCCGGAGCTATCGAGCAGGACGCCGACATCATCATGTTCGTCTACCGCGAA GAGGTGTACGAGAAGGACAAAGAGGACCTCAAGGGTAAGGCTGAGGTCATCATCGGCAAGCACAGGAGCGGCCCGACCGG AACGGTTCATCTGGCCTTCCGCGGCGAGTTCACCCGCTTCGAAAACCTGAGCGGCCGGGACGATTACTAA Protein sequence : MNATDMRKLPPQSIEAEMSILGGILVDNEAINRVLEILVPDDMYRESHRKILRAMIDLNERGEPCDLITMTTILKKKGEL EEVGGGAYLATLVDFVPMAANISYYCKIVKEKWLTRKLISAATDIVSKGFEDKIDTEELLDAAQKVIFEISENKIRPAYY QVSDILKDTIKNIELLYEKKELVTGVPTGYTDLDKLTAGFHAGDLVIIAGRPAMGKTTFALNVAQYAAIDADKAYPAAVF SLEMPKEQLVERLLCSVAKVDLSRLRSGHLVENDWPKLIKAGGKLHDAKIFIDDTPSITIMELRSKARRLKAEHNIGLIV IDYLQLMRGGANPESRQQEISEISRSLKGLAKELSIPVIALSQLNRGLEQRSDKRPMMSDLRESGAIEQDADIIMFVYRE EVYEKDKEDLKGKAEVIIGKHRSGPTGTVHLAFRGEFTRFENLSGRDDY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-69 | 46 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-78 | 44 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 1e-72 | 43 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 3e-72 | 43 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-65 | 43 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-65 | 43 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 5e-67 | 42 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 6e-70 | 42 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 1e-55 | 41 |
