Gene Information

Name : kdpB (Gbem_2607)
Accession : YP_002139411.1
Strain : Geobacter bemidjiensis Bem
Genome accession: NC_011146
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 3022980 - 3025049 bp
Length : 2070 bp
Strand : -
Note : -

DNA sequence :
ATGTCCAAACACGCACCGGAACCCATATCCATGTTCGATGCGCGGATCCTGAAGCCCGCGCTGCTGGAATCGATAAAGAA
GCTCGACCCGAGAGGGCTGTGGCGTAATCCCGTCATGCTGTGCGTCGAGATCGCCAGCTGCATCACCCTGATCACCTTCG
TCATGTCGCTCACCGGCGCCAACAGGGAGCCGGCCTGGTTCACAGGCCTAGTCTCCATTTGGCTCTGGCTCACCGTTATC
TTTGCCACCTTCGCCGAGGCGCTGGCGGAAGGGCGCGGCAAGGCCCGCGCCGCAAGCCTCAGGAAGAGCCGTACCGAGGT
GACTGCCAAACGCCTGAAAAACCCGGAATACGGCAGCTCTTACGAGACCGTCGCCGCGGAATCGCTCAGAAAGGACGATT
ACATACTGGTCGAGGCTCACGAGATGATCGCCGGTGACGGCGACGTCGTGGCAGGAGCCGCCCTGGTCAACGAAGCCGCG
GTGACCGGCGAATCCGCTCCGGTGGTGCGGGAATCAGGCGGCGACCGGAGCGCGGTCACCGGCGGCACGGAAGTGATCGC
CAACTCCATCATCGTGAGGATCACGGCCAATCCTGGCGAAACCTTCCTCGATCGGATGATCTCGCTGATCGAGGGGGCAA
AGCGGAGAAAAACCCCGAACGAGATCGCCCTGGAGGTGCTCCTCATCGCGCTCACCCTGGTCTTCCTGCTGGTCTGCGCC
AACATAAGCCCTCTCTCCGTCTACTCCGTAAAGGCGGCGGGACATGGGACTCCGGTATCGCTCACCGTGCTGGTGGCGCT
GTTCGTCTGTCTGGCTCCGACCACCATCGCGGCGCTCCTTCCCGCCATCGGCATCGCGGGAATGGACCGGCTCTTCCAGA
AAAACGTCATCGCCCTCTCCGGTCGCGCCATCGAGGCCGCAGGCGACGTCAACGTGCTCCTGCTGGACAAGACAGGCACC
ATCACGCTGGGCAATCGCGAGGCGGTGGAACTGGTCCCGGTTGGTGGGCACACCGAGAAGGAATTGGCTGAAGCCGCGCT
GATCGCATCGCTGACCGACGAGACTCCGGAGGGGAGGAGCGTCGTGGCCCTGGCCAGGAAAAAGTACGGCATGAGCATGG
AGTCGCTTCCTGCAGACGCGCAGAGCATCGCCTTCAGCGCCGAAACGCGCCTCTCCGGCGTCGATGTCGGCGGGAGGAAG
TACCGCAAGGGCGCCTCGGACTCCGCAATTTCCTTCGTGAAGGACATGGGCGCAGCCATTATCCCCGCGAACCTCAAAGA
CGTGGTCGACAAGATTGCCCGAGCTGGCGCCACTCCGCTCGTGGTCTGCTGCGATGCGGAGATATTCGGGGTTATCAATC
TGAAGGACATCATCAAAGGCGGCATCCAAGAGCGCTTTCAGCAACTGCGTAGCATGGGGATCAAAACAGTCATGATCACC
GGCGACAACCCCCTTACCGCCGCGGCAATCGCGGCAGAGGCCCAGGTGGACGACTTCTTGGCCCAGGCCAAACCGGAAGA
CAAGCTGCGTCTCATCAAGGAGAACCAGGAGCAAGGGTTTATGGTGGCCATGACCGGCGACGGTACCAATGACGCTCCGG
CGCTGGCCCAGGCGGACGTCGCGGTTGCGATGAACACCGGCACCCAGCCAGCGCGCGAGGCGGCAAACATCATCGACCTT
GACTCCAACCCGACCAAGGTACTGGACATCGTGGAGGTGGGTAAACAGATCCTGATGACGCGGGGAAACCTGACCACCTT
CAGCATCTCCAACGACGTTGCAAAGTATTTCGCCATCATCCCGGCCATGATGTTGTCGATCTACCCGCAATTGAACGTCT
TGAATGTGATGCACCTTGCCAGCCCTTTCAGCGCGATACTCTCAGCGGTCATTTTCAACGCGCTGATCATACCTGTACTG
GTGCCGCTGGCGCTTAAAGGAACGAAGTTCCGTCCCATGCCTGCCGAGAAGCTCTTGATCCACAACCTGCTCATATACGG
TCTGGGTGGCATGATCGCTCCCTTCGTCGGCATCAAGGCAATAGACATGGTGGTAGCTCTATTTGCCTGA

Protein sequence :
MSKHAPEPISMFDARILKPALLESIKKLDPRGLWRNPVMLCVEIASCITLITFVMSLTGANREPAWFTGLVSIWLWLTVI
FATFAEALAEGRGKARAASLRKSRTEVTAKRLKNPEYGSSYETVAAESLRKDDYILVEAHEMIAGDGDVVAGAALVNEAA
VTGESAPVVRESGGDRSAVTGGTEVIANSIIVRITANPGETFLDRMISLIEGAKRRKTPNEIALEVLLIALTLVFLLVCA
NISPLSVYSVKAAGHGTPVSLTVLVALFVCLAPTTIAALLPAIGIAGMDRLFQKNVIALSGRAIEAAGDVNVLLLDKTGT
ITLGNREAVELVPVGGHTEKELAEAALIASLTDETPEGRSVVALARKKYGMSMESLPADAQSIAFSAETRLSGVDVGGRK
YRKGASDSAISFVKDMGAAIIPANLKDVVDKIARAGATPLVVCCDAEIFGVINLKDIIKGGIQERFQQLRSMGIKTVMIT
GDNPLTAAAIAAEAQVDDFLAQAKPEDKLRLIKENQEQGFMVAMTGDGTNDAPALAQADVAVAMNTGTQPAREAANIIDL
DSNPTKVLDIVEVGKQILMTRGNLTTFSISNDVAKYFAIIPAMMLSIYPQLNVLNVMHLASPFSAILSAVIFNALIIPVL
VPLALKGTKFRPMPAEKLLIHNLLIYGLGGMIAPFVGIKAIDMVVALFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 2e-147 57
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 1e-147 57
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-124 53
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 3e-124 53
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-124 53
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-124 53
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-124 53
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 3e-126 53