Gene Information

Name : Gbem_0243 (Gbem_0243)
Accession : YP_002137070.1
Strain : Geobacter bemidjiensis Bem
Genome accession: NC_011146
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 286662 - 287336 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence : 
ATGAGAATTTTGGTAGTTGAAGATGAGAAGAAGGTCGCCAGCTTCATCAAGCGCGGGCTGGAGGAGGAGCAGTACGAAGT
CCATACGGCCGCGGACGGAGAGGAAGGTCTCAAGCTTGCGCTCGAGAAGCCGTTCGACCTGATCGTGCTTGACTGGATGC
TCCCCAAAAAGGACGGCCTTTCCGTCCTGAAGGAGCTGAGGGAGCGGAAGAACCTCACTCCGATCCTGATGCTGACCGCC
AAAGATTCCGTGGAAGATATCGTGGCAGGCCTCGATTCCGGATCCGACGACTACCTGACCAAGCCGTTCGCTTTCGCCGA
GCTTCTGGCCCGCGTCCGTGCGCTCATGAGGAGGAGCGAGCTCGACCGCGGTGCCGAGATCCGTTTCGCCGACCTGCGCC
TCGACCTGGTTACCCACAAGGTATGGCGCAAGGATAAGGAGATCGATCTCACTGCCAAGGAGTACGGCCTGCTCGAGTAC
TTCATGCGCAACCCGCACCAGGTGCTGACCAGGACCATGATCGCGGAGCACGTCTGGGATTACACCTTCGACAGCTTCAC
CAACATCATCGATGTCTATGTCAACTACCTCAGGAAGAAGATCGACCGCGAAGCTGACAAGAAGCTGATCCACACCGTCA
GGGGCGTAGGCTACATCCTGAAGGAAGAAGAATAG

Protein sequence : 
MRILVVEDEKKVASFIKRGLEEEQYEVHTAADGEEGLKLALEKPFDLIVLDWMLPKKDGLSVLKELRERKNLTPILMLTA
KDSVEDIVAGLDSGSDDYLTKPFAFAELLARVRALMRRSELDRGAEIRFADLRLDLVTHKVWRKDKEIDLTAKEYGLLEY
FMRNPHQVLTRTMIAEHVWDYTFDSFTNIIDVYVNYLRKKIDREADKKLIHTVRGVGYILKEEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-40 47
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-39 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gbem_0243 YP_002137070.1 transcriptional regulator BAC0111 Protein 3e-49 50
Gbem_0243 YP_002137070.1 transcriptional regulator BAC0308 Protein 4e-45 49
Gbem_0243 YP_002137070.1 transcriptional regulator BAC0197 Protein 2e-43 49
Gbem_0243 YP_002137070.1 transcriptional regulator BAC0125 Protein 9e-47 48
Gbem_0243 YP_002137070.1 transcriptional regulator BAC0638 Protein 4e-42 48
Gbem_0243 YP_002137070.1 transcriptional regulator BAC0347 Protein 9e-44 46
Gbem_0243 YP_002137070.1 transcriptional regulator HE999704.1.gene1528. Protein 2e-37 46
Gbem_0243 YP_002137070.1 transcriptional regulator BAC0083 Protein 4e-47 46
Gbem_0243 YP_002137070.1 transcriptional regulator NC_003923.1003417.p0 Protein 1e-39 44
Gbem_0243 YP_002137070.1 transcriptional regulator NC_013450.8614146.p0 Protein 1e-39 44
Gbem_0243 YP_002137070.1 transcriptional regulator NC_002951.3238224.p0 Protein 1e-39 44
Gbem_0243 YP_002137070.1 transcriptional regulator NC_007793.3914065.p0 Protein 1e-39 44
Gbem_0243 YP_002137070.1 transcriptional regulator NC_002758.1121390.p0 Protein 1e-39 44
Gbem_0243 YP_002137070.1 transcriptional regulator NC_010079.5776364.p0 Protein 1e-39 44
Gbem_0243 YP_002137070.1 transcriptional regulator NC_002952.2859858.p0 Protein 1e-39 44
Gbem_0243 YP_002137070.1 transcriptional regulator NC_007622.3794948.p0 Protein 1e-39 44
Gbem_0243 YP_002137070.1 transcriptional regulator AE015929.1.gene1106. Protein 9e-36 44
Gbem_0243 YP_002137070.1 transcriptional regulator NC_002952.2859905.p0 Protein 2e-37 44
Gbem_0243 YP_002137070.1 transcriptional regulator NC_002758.1121668.p0 Protein 2e-37 44
Gbem_0243 YP_002137070.1 transcriptional regulator NC_009641.5332272.p0 Protein 2e-37 44
Gbem_0243 YP_002137070.1 transcriptional regulator NC_013450.8614421.p0 Protein 2e-37 44
Gbem_0243 YP_002137070.1 transcriptional regulator NC_003923.1003749.p0 Protein 2e-37 44
Gbem_0243 YP_002137070.1 transcriptional regulator NC_007793.3914279.p0 Protein 2e-37 44
Gbem_0243 YP_002137070.1 transcriptional regulator NC_002745.1124361.p0 Protein 2e-37 44
Gbem_0243 YP_002137070.1 transcriptional regulator NC_009782.5559369.p0 Protein 2e-37 44
Gbem_0243 YP_002137070.1 transcriptional regulator NC_002951.3237708.p0 Protein 2e-37 44
Gbem_0243 YP_002137070.1 transcriptional regulator NC_007622.3794472.p0 Protein 2e-37 44
Gbem_0243 YP_002137070.1 transcriptional regulator HE999704.1.gene2815. Protein 1e-33 42
Gbem_0243 YP_002137070.1 transcriptional regulator NC_012469.1.7685629. Protein 5e-29 41
Gbem_0243 YP_002137070.1 transcriptional regulator AE016830.1.gene1681. Protein 2e-39 41
Gbem_0243 YP_002137070.1 transcriptional regulator NC_008702.1.4607594. Protein 8e-28 41
Gbem_0243 YP_002137070.1 transcriptional regulator AE000516.2.gene3505. Protein 2e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gbem_0243 YP_002137070.1 transcriptional regulator VFG1390 Protein 5e-51 50
Gbem_0243 YP_002137070.1 transcriptional regulator VFG0596 Protein 3e-40 47
Gbem_0243 YP_002137070.1 transcriptional regulator VFG1386 Protein 3e-45 43
Gbem_0243 YP_002137070.1 transcriptional regulator VFG1389 Protein 1e-40 43