Gene Information

Name : arsB-1 (Gbem_2349)
Accession : YP_002139157.1
Strain : Geobacter bemidjiensis Bem
Genome accession: NC_011146
Putative virulence/resistance : Resistance
Product : arsenite efflux pump
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 2726744 - 2727799 bp
Length : 1056 bp
Strand : -
Note : -

DNA sequence :
ATGTCTACCGGAGTTTCCCCAAAGCTGTCGTTTCTCGACCGCTATCTTACCCTTTGGATCTTCCTCGCCATGTTTGCAGG
GGTGGGAGCGGGGTACTTGTTTCCGGGAGTTGAAAGTTTCATCAACAGCTTCCAGGTAGGGACCACCAACATCCCTATTG
CCGCCGGCCTCATTCTCATGATGTACCCTCCCTTCGCCAAGGTGAAGTACGAGGAGATGCCGGAGGTCTTCCACAACAAA
CGGGTTCTCGGGCTTTCGCTGGTTCAAAACTGGCTGATAGGGCCGGTTCTGATGTTCATCCTGGCTGTCGCCTTTCTTCC
CGACAAGCCTGAGTACATGGTGGGACTCATCATGATAGGGCTCGCCAGATGCATCGCCATGGTCATCGTCTGGAACGATC
TGGCAAAGGGAAACACCGAGTACGCTGCGGGGTTGGTCGCCTTCAACAGCATCTTCCAGGTCCTCTTCTACAGCGTCTAT
GCCTGGTTCTTCATCACGGTCCTCCCGCCTCTGATCGGCCTGTCGGGCAGCATCGTGGAAGTCGGCATAGGGCAGATCGC
CAAGAGTGTCTTTATCTACCTTGGCGTCCCGTTTATCGCCGGGGCCATCACGCGCCTGGTCGGCGTCAAGGTAATGGGGA
AGGAACGCTACCACAGGGAGTTCGTGCCCAGGATCGGCCCGATCACACTGATTGCGCTTCTGTTCACCATCGTCGTCATG
TTCAGCCTGAAGGGGAACCTCATCGTTCAGCTTCCTCTCGACGTCGTCCGGATCGCGGTACCGCTGCTCATCTATTTCGT
CGCCATGTTCTTCGTCTCCTTCTGGATGGGGAAAAAGCTTGGGGCTGACTACAGCAAGACGACGACTCTTGCCTTCACCG
CCGCGAGCAACAATTTCGAATTGGCCATCGCCGTTGCGGTCGCCGTTTTCGGACTCAATTCCGGCGCCGCGTTTGCCGCG
GTGATCGGCCCATTGGTGGAAGTGCCGGTCATGATAGCCCTCGTGAATGTGGCTTTCTGGTTCCAGCGCCGCTACTTTTC
CGGTTCCAGCCTTTGA

Protein sequence :
MSTGVSPKLSFLDRYLTLWIFLAMFAGVGAGYLFPGVESFINSFQVGTTNIPIAAGLILMMYPPFAKVKYEEMPEVFHNK
RVLGLSLVQNWLIGPVLMFILAVAFLPDKPEYMVGLIMIGLARCIAMVIVWNDLAKGNTEYAAGLVAFNSIFQVLFYSVY
AWFFITVLPPLIGLSGSIVEVGIGQIAKSVFIYLGVPFIAGAITRLVGVKVMGKERYHREFVPRIGPITLIALLFTIVVM
FSLKGNLIVQLPLDVVRIAVPLLIYFVAMFFVSFWMGKKLGADYSKTTTLAFTAASNNFELAIAVAVAVFGLNSGAAFAA
VIGPLVEVPVMIALVNVAFWFQRRYFSGSSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 2e-81 60
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 8e-102 60
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 1e-101 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB-1 YP_002139157.1 arsenite efflux pump BAC0573 Protein 6e-121 73
arsB-1 YP_002139157.1 arsenite efflux pump BAC0004 Protein 2e-80 52