Gene Information

Name : Gbem_2210 (Gbem_2210)
Accession : YP_002139018.1
Strain : Geobacter bemidjiensis Bem
Genome accession: NC_011146
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2572050 - 2572754 bp
Length : 705 bp
Strand : -
Note : -

DNA sequence :
GTGGCCGATCCGATCATCGAGCTGACCGGGATATGCAAATCGTTCCAGGAGGGGGAGCGGGAGCGGGTGGTTTTCCGTAA
CGCCTCTCTTGCCGTGGAAACGGGCGAGTGGCTCTTTTTGTTAGGGCGCAGCGGCTCGGGTAAATCAACCCTGCTCAACC
TGTTAAGCGGCATCGACCTTCCCGATTCGGGCGAAGTGCGGGTGGCGGGTCAGCCCCTGAACCGCCAGAGCGAACGCGAG
CGGACCCTGTTCCGGCGCAGCAGCATCGGCTTCGTCTTCCAGTTCTACAATCTCATCCCCACCTTGACCGTCCTGGAAAA
CGTCCTGCTCCCCCTGGAGCTGGCCGGCCTCCTCAACCCAGAACACGATAAATTGGCGCGCGACCTGCTGGAGCAGGTGG
GACTCGCGGACCGCGCGGCGAGCTTTCCGGACCGGCTGTCCGGCGGCGAGCAGCAGCGCGTTGCCGTGGCACGCGCCCTG
GTGCACCGGCCCAAGCTGGTGCTGGCCGACGAGCCCACCGGCAATCTCGACGCCGAGACGGGGCGGCAGGTGCTCGACCT
TTTCCAGCGCCTGTTAAGGGAGAGCGGAACGACGCTGGTGCTGGTGACCCATAGCGCCGAGGTCGCGGCCCTGGCCGACC
GGGTGCTCACCATCGAGAACGGGCTTCTGGTCGAGGCCGGGCGCCGCTCTGGTGGTAAACCATGA

Protein sequence :
MADPIIELTGICKSFQEGERERVVFRNASLAVETGEWLFLLGRSGSGKSTLLNLLSGIDLPDSGEVRVAGQPLNRQSERE
RTLFRRSSIGFVFQFYNLIPTLTVLENVLLPLELAGLLNPEHDKLARDLLEQVGLADRAASFPDRLSGGEQQRVAVARAL
VHRPKLVLADEPTGNLDAETGRQVLDLFQRLLRESGTTLVLVTHSAEVAALADRVLTIENGLLVEAGRRSGGKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-30 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gbem_2210 YP_002139018.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-28 48
Gbem_2210 YP_002139018.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 3e-40 46
Gbem_2210 YP_002139018.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-33 44
Gbem_2210 YP_002139018.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 6e-30 44
Gbem_2210 YP_002139018.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-33 42
Gbem_2210 YP_002139018.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 9e-20 41