Gene Information

Name : Gbem_2109 (Gbem_2109)
Accession : YP_002138918.1
Strain : Geobacter bemidjiensis Bem
Genome accession: NC_011146
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2448845 - 2449525 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence : 
ATGACAATCCTGCAAACCCAAGAGGTCAGCAAAAGCTACCGTATCGGAAACCGCTTGATCAAGGTGCTCGACTCCGTCTC
GCTCTCGGTCGAGACCGGCGAGTTCCTGGTGGTGAAGGGGGAAAGCGGCAGCGGCAAATCGACGCTGCTCACCATCCTTT
CCGGGCTGGACCGCCCGGACCGGGGACGGGTCCTCATCGGCGGGGAAGACATCACCGACCTAGGCGAAGACGCCCTGGCC
CCCTTGAGAAACAGCGCCTTCGGCTTCGTGTTCCAGTCCTTCCACTTGGTCCCCTCCTTAAACGCCCTGGAGAACGTGAT
GTTTCCGGCCGAGCTCAAAGGCGATGCCGAAGCCCGCGCCAAGGCCGAAGCCCTTCTGGAAAGAGTCGGACTATCCGGGA
GACTCACAAGTTTCCCGCACCAGCTCTCCGGCGGCGAAAAACAGCGCTGCGCCATCTGCCGCGCCCTCATCAACGACCCG
CGCATCATCTTCGCCGACGAGCCGACCGGCAACCTCGATTCCATAAATGGCGCCGCCATCATGGAGCTGCTCCTGGAACT
GCAGCGCGAACGCGGCACCACCCTGATCCTTGTGACCCACAGCCCCGAGATCGCCCAGCGGGCGCATCGCGTGGTCACGC
TCAAAGACGGCAGGATCGTCACGGGGCGGGAGCATGGTTAA

Protein sequence : 
MTILQTQEVSKSYRIGNRLIKVLDSVSLSVETGEFLVVKGESGSGKSTLLTILSGLDRPDRGRVLIGGEDITDLGEDALA
PLRNSAFGFVFQSFHLVPSLNALENVMFPAELKGDAEARAKAEALLERVGLSGRLTSFPHQLSGGEKQRCAICRALINDP
RIIFADEPTGNLDSINGAAIMELLLELQRERGTTLILVTHSPEIAQRAHRVVTLKDGRIVTGREHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gbem_2109 YP_002138918.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-33 46
Gbem_2109 YP_002138918.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-40 45
Gbem_2109 YP_002138918.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-42 43
Gbem_2109 YP_002138918.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 7e-38 43