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Name : capL-1 (Gbem_1754) Accession : YP_002138566.1 Strain : Geobacter bemidjiensis Bem Genome accession: NC_011146 Putative virulence/resistance : Virulence Product : UDP-N-acetyl-D-galactosamine 6-dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 2021930 - 2023216 bp Length : 1287 bp Strand : + Note : - DNA sequence : ATGACGCACAATCGTAAGATTTCGGTGGTAGGGCTTGGGTACGTTGGGCTCCCGGTGGCGGTCGCCTTCGGCAGGGTGCA GCGAACCATAGGGTTTGACATCAGCGCGAAGAGGATCGAGGAGTTGCGTTCAGGATGGGACCGTACGGGGGAAGTTTCCT CAGAGGACTTGGTCGGCGCCGACATCTGCTTCACCGATAATATCGATGAGCTGGCGCGGGCGGATTTTCACGTGGTGGCG GTGCCGACACCTGTCGATCCCGCCAACCAGCCGGACCTCTCCCTGCTCCGCAGCGCATCGGAAACGGTGGGGAGGGCGCT CAAAAAGGGTGACATCGTGGTCTACGAGTCTACGGTCTATCCGGGCGTCACCGAGGAGGTCTGCCTCCCCATCCTGGAGT CGGTATCGGGGCTGAAGAGTCCTGTAGACTTCACCGTCGGTTACAGCCCGGAGCGGATCAATCCTGGCGACAAGGAGCAT ACCTTCACCAGCATCCTCAAGGTCGTCTCCGGTCAGGATCAGCACACCTTGGAACAGGTGGCCGCGGTATATTCCTCGGT GGTCAAGCCGGGGGTGCACCGTGCACCATCCATCAAGGTAGCCGAGGCCGCCAAGGTCATCGAGAACACGCAGCGCGACC TGAACATCGCCCTCATGAACGAGCTGGCGCTGATTTTCGACCGTTTGGGGATCGACACCAGCGAGGTGCTGGCTGCGGCG GGAAGCAAATGGAACTTCCTGAACTTCAAGCCGGGGCTGGTAGGCGGCCACTGCATCGGCGTCGACCCATACTATCTCAC CTACCAGGCTGAGAAGATCGGGTACATCCCCCAGGTTATCCTGGCCGGGCGGCGCATAAACGACGGCATGGGCAAATTCA TCGCGCAACGGGCGGTAAAGGAGATCATCAGGGCGGGGCACCACGTGCTTGGCTCGTATGTGACGGTGCTGGGACTGACC TTCAAGGAGAATTGCCCCGACCTGCGCAACTCGAAGGTCGTGGATATTTTGACCGAGCTCAGTGACTATGGGTTGAAGGT GCAGGTATGCGACCCGATAGCAGACCCGGTTGAGGCGCAGCAGGCCTACGGGGTAACACTCAAGGAGCCCGGAAAACTCC ATCCTGCGGTTGCTGTTATCGCCGCGGTCGCCCACGACTCCTACCGCGCCTGGGGGGCCGCCAAGTTCGCGAGCCTTATG GTAGAGAACCCGGTGCTCATAGACGTAAAGGGTATTTACAACAGTCGGGCCATGTCTGCCGCGGGGATTCGGGTCTGGTG CCTGTAG Protein sequence : MTHNRKISVVGLGYVGLPVAVAFGRVQRTIGFDISAKRIEELRSGWDRTGEVSSEDLVGADICFTDNIDELARADFHVVA VPTPVDPANQPDLSLLRSASETVGRALKKGDIVVYESTVYPGVTEEVCLPILESVSGLKSPVDFTVGYSPERINPGDKEH TFTSILKVVSGQDQHTLEQVAAVYSSVVKPGVHRAPSIKVAEAAKVIENTQRDLNIALMNELALIFDRLGIDTSEVLAAA GSKWNFLNFKPGLVGGHCIGVDPYYLTYQAEKIGYIPQVILAGRRINDGMGKFIAQRAVKEIIRAGHHVLGSYVTVLGLT FKENCPDLRNSKVVDILTELSDYGLKVQVCDPIADPVEAQQAYGVTLKEPGKLHPAVAVIAAVAHDSYRAWGAAKFASLM VENPVLIDVKGIYNSRAMSAAGIRVWCL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-116 | 60 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-98 | 53 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-98 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| capL-1 | YP_002138566.1 | UDP-N-acetyl-D-galactosamine 6-dehydrogenase | VFG0431 | Protein | 1e-98 | 53 |
