Gene Information

Name : Gbem_1626 (Gbem_1626)
Accession : YP_002138440.1
Strain : Geobacter bemidjiensis Bem
Genome accession: NC_011146
Putative virulence/resistance : Virulence
Product : glycosyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 1886658 - 1887218 bp
Length : 561 bp
Strand : +
Note : -

DNA sequence :

ATGAAAAGAACCTTCGATTTTGTGTTGTCTTTTTTGCTGCTTGCCTGTCTCGGTGTTCCAATGCTTCTGATCGCCCTGCT
GGTGAAGCTGACTTCGCCGGGGCCGGTTCTGTACTGGTCCGATAGGGTGGGAAGGTGCAACGTCATCTTTAGGATGCCAA
AGTTCCGCAGCATGCGCGTCGACACTCCTGCTGTTGCCACCCACCTGCTCACCAATCCGGACCAGTTCCTTACACCGATC
GGGAAGTTCCTTAGGAAGTCTAGTTTGGATGAACTGCCGCAACTTCTGAGTATACTGACGGGGAACATGAGCTTCGTCGG
CCCCCGGCCGGCGCTCTTCAACCAGGATGACCTCATCGAACTGAGGACCCGTAAGGGTGTTCATCTCATTACCCCTGGCC
TGACTGGCTGGGCCCAAGTGAACGGCAGGGATGAGCTTCTCATACCGGTCAAGGTCGAGTTCGATTCCTACTACGTTCAA
AACAGCAGTTTCCTTTTCGACCTTCGCATCATCTTTCTTACTTTGGTTAAGGTACTTAAAACAGATGGGGTGCAGCACTG
A

Protein sequence :

MKRTFDFVLSFLLLACLGVPMLLIALLVKLTSPGPVLYWSDRVGRCNVIFRMPKFRSMRVDTPAVATHLLTNPDQFLTPI
GKFLRKSSLDELPQLLSILTGNMSFVGPRPALFNQDDLIELRTRKGVHLITPGLTGWAQVNGRDELLIPVKVEFDSYYVQ
NSSFLFDLRIIFLTLVKVLKTDGVQH

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
cap1N	AAL26667.1	type 8 capsule synthesis gene	Virulence	SCCcap1	Protein	1e-38	51
SSP0070	YP_300160.1	capsular polysaccharide synthesis protein	Not tested	SCC15305cap	Protein	7e-40	47

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Gbem_1626	YP_002138440.1	glycosyltransferase	VFG1369	Protein	9e-32	52
Gbem_1626	YP_002138440.1	glycosyltransferase	VFG1309	Protein	1e-40	49