|
Name : kdsD (Gbem_1602) Accession : YP_002138416.1 Strain : Geobacter bemidjiensis Bem Genome accession: NC_011146 Putative virulence/resistance : Virulence Product : arabinose-5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 1857426 - 1858394 bp Length : 969 bp Strand : + Note : - DNA sequence : TTGATAATAGAAGAAGCGAAGAGGGTGATACGGGTCGAGGCTGAGGCTCTTTTGAACCTTGAGGCGTCGATCAACGGAGC GTTCGAACAAGCGGTGCAGATGATCCTGAACAGCGAGACCGGCCGCGTCGTGGTGACCGGCATGGGCAAGTCCGGCCTCA TCGGCCAGAAGATCGCCTCCACCATGGCTTCGACGGGGACTCCCGCGTTTTTCCTGCACCCGGCGGAAGGGATCCACGGC GACCTCGGCATGATCATGAAGGGCGACGTCGTCATCGCCATCTCCAACTCCGGCGAGACCGACGAGGTGGTGAAAATCCT CCCCATCATCAAGCGGCTGGGCGCATCGCTCATCGCCATGGCCGGCAACCCCACCTCCACCCTCGCCAAGAGCGGCGACA TCTTTCTCGACATATCGGTAAAGGAAGAGGCGTGCCCGCTCGGGCTTGCCCCCACGGCATCGACGACCGTCACCCTCGCC ATGGGGGATGCCATCGCGGTGGCGCTTCTGGTCAGCCGCGGCTTCAAGGCCGAAGACTTCGCCATGTTCCACCCCGGCGG CGCGCTGGGGCGCAGGCTCCTATTGAGGGTCCAGGACATCATGCATTCCGGTGAGGCGCTCCCCCTGGTCAACGAAAAGA CCCTGATGCGGGAGGCGCTTTTCACCATCACCTCCAAAGGTCTCGGCATCACCGGCGTCACCTCCGACGACGGCGCCCTC ATAGGCGTCATCACCGACGGCGATCTGCGGCGTGCGCTCGGCAAGGGGCTCGACATCATCAACCTCCCTGCCGCGGAGCT GATGAAAGCCGGCGCCAAGCGGATTAATCGCGAGGAGCTTGCGGCGCGGGCCCTGCAGCAGATGGAGCAATACTCCATCA CCTCGCTCTTTGTCTTCGACGATGATAAGGCCAAGGCCCCGGTAGGTATCGTCCATCTGCACGACCTCCTGAAGGCCGGC ATAGCATAA Protein sequence : MIIEEAKRVIRVEAEALLNLEASINGAFEQAVQMILNSETGRVVVTGMGKSGLIGQKIASTMASTGTPAFFLHPAEGIHG DLGMIMKGDVVIAISNSGETDEVVKILPIIKRLGASLIAMAGNPTSTLAKSGDIFLDISVKEEACPLGLAPTASTTVTLA MGDAIAVALLVSRGFKAEDFAMFHPGGALGRRLLLRVQDIMHSGEALPLVNEKTLMREALFTITSKGLGITGVTSDDGAL IGVITDGDLRRALGKGLDIINLPAAELMKAGAKRINREELAARALQQMEQYSITSLFVFDDDKAKAPVGIVHLHDLLKAG IA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 2e-48 | 42 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 3e-48 | 41 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 3e-48 | 41 |
