|
Name : tkt (Gbem_1379) Accession : YP_002138194.1 Strain : Geobacter bemidjiensis Bem Genome accession: NC_011146 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 1593655 - 1595790 bp Length : 2136 bp Strand : + Note : - DNA sequence : ATGACCATCGAATTAAATCCGGGCAGCGCCGGGAACCTGGACCAGCTCTGCATCAACACCTTGCGTTTCCTGGCGGTGGA CGCCATCCAAGAAGCCAACAGTGGCCATCCCGGCATGCCGATGGGGGCAGCCCCCATGGCATACCTGCTCTGGACCCGAT TCCTGAGGCACAATCCCGCCTCCCCGGGTTGGTTCGACCGGGACCGCTTCGTCCTCTCCGCGGGGCATGGCTCCATGCTG CTTTACTCCCTGCTGCACCTGACCGGCTACGACCTCCCCCTGTCGGAGCTGAAACGCTTCCGACAGTGGGGAAGCCGCAC CCCCGGACACCCGGAGCGGGGGCTTACTCCGGGGGTAGAGCTGACCACCGGGCCTTTGGGGCAGGGGTTCGCCGGCGCCG TCGGCATGGCGATAGCAGAATCCCATCTTGCCGCCCGCTATAACCGGCCGGGGTTCACGCTCGTGGACCACTTCACCTAC GCCCTTGTCGGTGACGGCGACCTCATGGAAGGGGTGGCGGCCGAGGCGGCCTCGCTTGCCGGGCACCTGCGCCTTGCAAA GCTCATCTGCCTATACGACGACAACCGCATCACGCTCGCCGCCGCAACCGATCTGAGCTTCACCGAGGACCGCGGCGCGC GCTTCAGGGCCTACGGCTGGCAGGTGCTCGAGGTTGCCGACGGCAACGATCCGGAGGCGATCGGGTGGGCCTTGGAGGAG GCGCGGGCGGAAAAAGAGCGCCCCTCCCTGGTCATGGTGCGCACCCGGATCGGGTTCGGCTCGCCGCAGAAACAGGACAG CTTCGAGGCGCACGGCGCACCCCTTGGGGTGGAGGAGGTGCGCCGCACCAAGGATGCGCTCGGATGGCCGCAGGAGCCGC AGTTCCACATCCCGCCCGAGGCGCTGGCGCGGTTTCGCGAGGCGCTGGTGAAAGGCGCCGTGGAGGAGCGGGCCTGGGAG TCGGTCATGGCGGGTTACGACGCGGCGTACCCGGCTGAGAGCGCCGAACTGACGCAGGTTCTGGCTGGGGAGCTGCCGCA GGGGTGGCAGGAGGCTCTGCCGGAATTCCCCGCCGACGCCAAGGGGATGGCGACGCGGGTAGCCTCGGCAAAGGTGCTGA ACGCCTTGGCCCAGAGGGTGCCGCAACTTTTCGGCGGCTCCGCCGACTTGAACCCCTCGACGCTCACCGCGCTCGCCGGC AAGGGCGACTTCCAGCCCGAAAGCTTCGACCCGCTGGACAGGCAGGGGGCGGTGGGGGGGGCATGGGGGCGCGCCGGGGC GAACCTGCACTTCGGCGTCCGCGAGCACGCCATGGGGGCCATCCTGAACGGAATGGCGGCGCACGGCGGCACGCTTCCCT ACGGCGCCACCTTCCTCACCTTCTCCGATTATCTCCGCCCCGTGCTCAGGCTGGCGGCGCTGTCGCGGCTCAAGGTGATC CACATCTTCACCCACGACTCCATAGCGCTGGGGGAGGACGGGCCGACCCACCAGCCGGTGGAACAGCTGGCTTCCCTGCG CGCCATCCCGCGCCTGGTGGTATTTAGGCCTGGGGACGCCAACGAGTGCGTTGAGGCCTGGCGCGCGGCGCTCCAGGTCG AGGGGCGGCCGGTGGCCCTCGTGCTCTCGCGCCAGGCGCTGCCCACTTTGGACCGTGGGGAGCTGGGCGCGGCGGCGGGG GTGCTCCGGGGAGGCTACGTCCTCGCCGAGGCGCGGCAGGGGGCGCCTCGCCTGATCCTCATCGCCACTGGATCCGAGCT TTCCCTGGCCCTGGCTGCGCGCAATTCGCTTGAGGAGCGCGGCCTCGCGGTCCGCGTCGTCTCTCTCCCCAGTTGGGAGC TCTTCGACGAGCAGCCGCAGGAGTACCGGGACTTCGTGCTGCCGCCTACGATGACGGCGCGGCTGGCGATCGAGGCGGGG GCGACCCAGGGATGGCACCGCTACCTGGGGTCGGGGGGGATAGTCTTGGGAGTCGACGATTTCGGGGCCTCTGCCCCGGG AGAGGTCGTCTTGAGGGAGTATGGTTTCACCGTGGACCATGTTTGTGGCATGGCGCTGCAATTGACAGGGGGCGCGGGCC CCGGCCTGGGCGCGGCGCCCGAAAAACCGCCGGAGGCACCCTCTCCGAAACCGTAG Protein sequence : MTIELNPGSAGNLDQLCINTLRFLAVDAIQEANSGHPGMPMGAAPMAYLLWTRFLRHNPASPGWFDRDRFVLSAGHGSML LYSLLHLTGYDLPLSELKRFRQWGSRTPGHPERGLTPGVELTTGPLGQGFAGAVGMAIAESHLAARYNRPGFTLVDHFTY ALVGDGDLMEGVAAEAASLAGHLRLAKLICLYDDNRITLAAATDLSFTEDRGARFRAYGWQVLEVADGNDPEAIGWALEE ARAEKERPSLVMVRTRIGFGSPQKQDSFEAHGAPLGVEEVRRTKDALGWPQEPQFHIPPEALARFREALVKGAVEERAWE SVMAGYDAAYPAESAELTQVLAGELPQGWQEALPEFPADAKGMATRVASAKVLNALAQRVPQLFGGSADLNPSTLTALAG KGDFQPESFDPLDRQGAVGGAWGRAGANLHFGVREHAMGAILNGMAAHGGTLPYGATFLTFSDYLRPVLRLAALSRLKVI HIFTHDSIALGEDGPTHQPVEQLASLRAIPRLVVFRPGDANECVEAWRAALQVEGRPVALVLSRQALPTLDRGELGAAAG VLRGGYVLAEARQGAPRLILIATGSELSLALAARNSLEERGLAVRVVSLPSWELFDEQPQEYRDFVLPPTMTARLAIEAG ATQGWHRYLGSGGIVLGVDDFGASAPGEVVLREYGFTVDHVCGMALQLTGGAGPGLGAAPEKPPEAPSPKP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 7e-150 | 50 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 7e-147 | 49 |
