|
Name : pulE-1 (Gbem_1279) Accession : YP_002138094.1 Strain : Geobacter bemidjiensis Bem Genome accession: NC_011146 Putative virulence/resistance : Virulence Product : type II secretion system ATPase PulE Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1476885 - 1478606 bp Length : 1722 bp Strand : + Note : - DNA sequence : ATGCTGAAACCTTTCCGAAAGAAAAGACTGGGCGACATCCTGCTGGAGCGGGGGGACCTGACTCAGGACCAGCTCGCCTA CGCGCTGGACAAGCAGCATAGCACCAAGGAACGACTGGGGATCATCTGCCTGGCCGACGGGCTGATCAGCGACATCGTGC TGGCCATGGCGCTCGCCGAGCAGTTCGGCCTCGAGTACGTGGACCTGAAGGGGGTGCGCCCGGACGAGTCCCTGTTCAAC TTCATCCCGCCCGAGGTCACGTTCCGCTTCCACTTCGTGCCGCTGGATTTGCAGGGGGACCTGCTGGTGGTGGCCATCTC AGACCCCACCGCAGTGCTGCAGCTGGATGAGATGGCGCTCCTTCTCGAGCGCCCGCTGCTTTTCAAGGTGGCCGCCGAAT CGGAAATCGCCTACCATCTGAAACGGGGCGAGGGGACCAGCCGGGTGCTGAAGGAGGTCTCCGAGGACTTCATGCTGCAG CTGGTGACCGAGACCGACAAAGGGGAGGAGATTCTCTCCGTCGAGAACGTCACCGCGGACACGAGCCCCATCATCAAGCT GGTGAACTCCACCATACTGGATGCCCTCACCAGGCGCGCCTCCGATATTCATATCGAGACCGCGCAGGACGGCGTCCTCA TCAAGTACCGCATCGACGGCGTCCTCTACAAGGCCACCGACCCCATCGACTCCCATTTCCAGGGGCCGCTCATCTCCCGT CTCAAGGTCATGAGCGAACTGGACATCTCGGAGCGCCGCATCCCGCAGGACGGCCGCTTCAAGGTCCGCATCGGCTCCAA GTCCATCGACTTCCGCGTCTCCATCATGCCTAGCGCCTTCGGCGAGGACGCGGTCATCCGTATCCTCGACAAGGAGAGCA TCGCCAGCGACCTGCGGGGGCTTACCCTGGAGACGCTGGGGATGGCGCCCCGCGAGATCAAGCGCTTCCGGAAGATGATC AAGGAGCCCTACGGCATGGTGCTGGTAACCGGGCCGACCGGTTCGGGCAAGACCACCACCCTCTACGGAGCCTTGACCGA GATACATACCGGTCTGGAAAAGATCATCACCATCGAGGACCCGGTCGAGTACGTCCTCTCCGGCATCACCCAGATCCCAG TCAACGAGAAGAAGGGGCTCACCTTCGCCCGGGGCCTGCGCTCCGTCCTGCGCCACGACCCGGACAAGATCATGGTGGGT GAGATCCGCGACTCGGAGACGGCGCAGATCGCGGTGCAGTCGGCGCTCACAGGCCACCTGGTGTTCACCACGGTGCACGC CAACAACGTCTTCGACGTCATCGGCCGCTTCACCCACATGGGAATCGACCCCTACAACTTCGTGGCCTGCCTTAACTGCG TCATGGCGCAACGCCTGGTCAGGAAGATCTGCCCCGCCTGCCGCAAGCCGGTGACGGTTACCGACGACGAACTGCGCGAG TCGGCGATCGACCCGGAAAGCACCCGCGGCCTGACCCTCTACGAGGCCCGTGGATGCGACGAGTGCAACGGTACCGGCTA CCGCGGCCGCTCCGCCATCGTCGAGCTTTTGGACCTGAACGACGAGATCAGGGAACTGATCATCGCCAAGTCACCGGTGG CCGCCCTCAAAAAGGCCGCCAAGGCTGCAGGAACCATGTTCCTCCGGGAGAGCGCGGTAGCCAAGGTGCTGGCGGGCGAG ACCACGATAAAGGAGATCAACCGTGTCACTTTCGTGGAGTAG Protein sequence : MLKPFRKKRLGDILLERGDLTQDQLAYALDKQHSTKERLGIICLADGLISDIVLAMALAEQFGLEYVDLKGVRPDESLFN FIPPEVTFRFHFVPLDLQGDLLVVAISDPTAVLQLDEMALLLERPLLFKVAAESEIAYHLKRGEGTSRVLKEVSEDFMLQ LVTETDKGEEILSVENVTADTSPIIKLVNSTILDALTRRASDIHIETAQDGVLIKYRIDGVLYKATDPIDSHFQGPLISR LKVMSELDISERRIPQDGRFKVRIGSKSIDFRVSIMPSAFGEDAVIRILDKESIASDLRGLTLETLGMAPREIKRFRKMI KEPYGMVLVTGPTGSGKTTTLYGALTEIHTGLEKIITIEDPVEYVLSGITQIPVNEKKGLTFARGLRSVLRHDPDKIMVG EIRDSETAQIAVQSALTGHLVFTTVHANNVFDVIGRFTHMGIDPYNFVACLNCVMAQRLVRKICPACRKPVTVTDDELRE SAIDPESTRGLTLYEARGCDECNGTGYRGRSAIVELLDLNDEIRELIIAKSPVAALKKAAKAAGTMFLRESAVAKVLAGE TTIKEINRVTFVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-86 | 44 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 9e-87 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pulE-1 | YP_002138094.1 | type II secretion system ATPase PulE | VFG0182 | Protein | 1e-82 | 46 |
| pulE-1 | YP_002138094.1 | type II secretion system ATPase PulE | VFG1880 | Protein | 1e-73 | 44 |
| pulE-1 | YP_002138094.1 | type II secretion system ATPase PulE | VFG2048 | Protein | 6e-88 | 43 |
| pulE-1 | YP_002138094.1 | type II secretion system ATPase PulE | VFG1876 | Protein | 4e-81 | 42 |
