Gene Information

Name : kdpE-1 (Gbem_1172)
Accession : YP_002137987.1
Strain : Geobacter bemidjiensis Bem
Genome accession: NC_011146
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1364086 - 1364793 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAGAGAGCCAAGAGGCGACCGGGCAGCGCATACTCGTCATCGACGACGAGGCGGCCATTCGCCGCTTCCTGCATTC
CGCGCTGTCCTCGGATGAATTCATCCTCCACGAGGCCGATTCCGGGCACGGCGGGCTATCAGCCGCCGCGGCCTTGAGGC
CCGACCTGATCCTATTGGACCTGGGGCTTCCCGACCTGGAGGGTATCGAGGTGATCCGCCGTATCCGCGAGTGGTCCCAG
GTCCCCATCATCGTCCTCTCGGTGCGCGAGCGTGAGGACGACAAGGTGGCGGCTCTCGACGCCGGGGCCGACGACTACCT
CACCAAGCCCTTCGGGGTGGGGGAACTGCTGGCCCGCATGAGGGCCTCCCTGCGCCGTTCCGCGGTGCAGCTCTCCGAGC
CGGTCTTCTCAAGCGGCGACCTTACGGTGGACCTGAACCTGCGCCGGGTGACGGTGGAGGGAGCCGAGGTCCAGTTGACG
CCCACCGAGTACGACCTCTTGCGCCTGCTCATCACCCACGCGGACAAGGTCATAACCCACAGCCAGATCCTGAAGCAGAT
CTGGGGGGTGGCGTACCAGGATCAGCCCCAGGTGCTCAGGGTTACCATCAGCAACCTGAGGAAGAAGGTCGAGCGGGACC
CCTCGCGCCCCAGGCACATCACCACCGAACCCGGGGTCGGGTATCGGTTCAAGCAGGTGCAACCATGA

Protein sequence : 
MKESQEATGQRILVIDDEAAIRRFLHSALSSDEFILHEADSGHGGLSAAAALRPDLILLDLGLPDLEGIEVIRRIREWSQ
VPIIVLSVREREDDKVAALDAGADDYLTKPFGVGELLARMRASLRRSAVQLSEPVFSSGDLTVDLNLRRVTVEGAEVQLT
PTEYDLLRLLITHADKVITHSQILKQIWGVAYQDQPQVLRVTISNLRKKVERDPSRPRHITTEPGVGYRFKQVQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 6e-29 42
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 4e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE-1 YP_002137987.1 transcriptional regulator NC_003923.1003417.p0 Protein 3e-23 42
kdpE-1 YP_002137987.1 transcriptional regulator NC_013450.8614146.p0 Protein 3e-23 42
kdpE-1 YP_002137987.1 transcriptional regulator NC_002951.3238224.p0 Protein 3e-23 42
kdpE-1 YP_002137987.1 transcriptional regulator NC_007793.3914065.p0 Protein 3e-23 42
kdpE-1 YP_002137987.1 transcriptional regulator NC_002758.1121390.p0 Protein 3e-23 42
kdpE-1 YP_002137987.1 transcriptional regulator NC_010079.5776364.p0 Protein 3e-23 42
kdpE-1 YP_002137987.1 transcriptional regulator NC_002952.2859858.p0 Protein 3e-23 42
kdpE-1 YP_002137987.1 transcriptional regulator NC_007622.3794948.p0 Protein 3e-23 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE-1 YP_002137987.1 transcriptional regulator VFG1390 Protein 1e-23 42