Gene Information

Name : AnaeK_0413 (AnaeK_0413)
Accession : YP_002132784.1
Strain : Anaeromyxobacter sp. K
Genome accession: NC_011145
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 468538 - 471150 bp
Length : 2613 bp
Strand : -
Note : TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA; SMART: AAA ATPase; KEGG: ade:Adeh_0385 ATPase AAA, ClpA/B

DNA sequence :
ATGCGAATGGAAAAGCTCACCGTGAAGGCGCAGGAGGTCCTCGCCGCCGCGCAGGGGGAGGCGCGCCGCCGCGACCACCA
GGCCGTGGACGTCGAGCACCTCGTGCTCGCGCTGCTGGCGCAGGAGGAGGGCATCGCGCGCCCGGTGCTGGAGAAGATCG
GCGCGGACCCGCGCCTGGTCGCCTCGCGGGTGGAGGACGAGCTGCGCTCGCTGCCGAAGGTGTCGGGCGCGGAGCCCTAC
CCGGCCAACCGGCTGCTGAAGCTCTTCGACCGGGCCGAGGACGGGGCCCGCAAGCTGAAGGACGAGTACGTCTCGACCGA
GCACCTGCTGCTCGCCGCCGCCGAGGACAAGGGCGGCGCCGGCGACGCGCTGCGCGCGTCCGGCGCCACGCCCGACCGCG
TCCGCCAGGCGGTGCAGGAGGTGCGGGGCGGCGCGCGCGTCACCTCGCCCGAGGCCGAGAGCCAGTACCGCGCGCTCGAG
AAGTACGCGAAGGACCTCACCGACCTCGCCAGGAAGGGCAAGCTCGACCCGGTCATCGGCCGGGACGACGAGATCCGGCG
CGTGGTCCAGATCCTGTCGCGCCGCACCAAGAACAACCCGGTGCTGGTGGGCGACCCCGGCGTGGGCAAGACCGCCATCG
TGGAGGGCCTGGCCCGCCGCATCGTGGACGGCGACGTCCCGGAGGGCCTGAAGAACAAGCGGCTGCTCGCGCTCGACCTG
GGCGCGCTGCTCGCCGGCGCGAAGTTCCGCGGCGAGTTCGAGGAGCGGCTGAAGGCCGTGCTGAAGGAGGTGACCGGCTC
GGAGGGCCAGATCATCCTCTTCATCGACGAGATGCACACCATCGTGGGCGCCGGCGCCGCCGAGGGCGCCATGGACGCGG
GCAACATGCTGAAGCCCGCGCTCGCCCGCGGCGAGCTGCACGCGGTGGGCGCCACCACCGTGAACGAGTACCGCAAGCAC
ATCGAGAAGGACCCGGCGCTGGAGCGGCGCTTCCAGCCGGTGTTCGTGGGCGAGCCGTCGCTCACCGACACCATCTCGAT
CCTGCGCGGCCTGAAGGACCGGTACGAGCTGCACCACAAGGTCCGCATCCAGGACGCGGCGCTGGTGGAGGCGGCGCGGC
TGTCGAGCCGCTACATCACGGATCGCTTCCTGCCCGACAAGGCCATCGACCTGGTGGACGAGGCGGCCAGCCGGCTGCGC
ATCGAGATCGACTCGATGCCGACCGAGGTGGACGAGGTGCGCCGGCGCATCGGGCAGCTCGAGATCGAGCGGCAGGGCCT
GCGCAAGGAGCAGGACGAGGCCTCCCGCGCGCGGCTCGCCGCGGTCGAGAAGGAGCTCGCCGCGCGCAACGAGGAGTTCA
CCGCGCTGAAGGGGCGCTGGGACGCCGAGAAGGCGGTGATCCAGGAGCTGAGCCAGGCGCGCCAGGAGCTGGAGACGCTG
AAGGTCGAGCAGGCCGCGGCCGAGCGGCAGGCCGACTTCCAGAAGGCCGCCGAGATCAAGTTCGGGCGGCTGCCGGAGCT
GACGCGGCGGGTGAAGGCCGCCGAGGAGAAGCTGGCCGAGGCGCAGACCCGCGGCGCCATGCTGAAGGAGGAGGTGACGC
CGGAGGAGATCGGCGAGGTGGTCTCGAAGTGGACCGGCATCCCGGTCTCGCGCCTGATGGAGGGCGAGGTCGAGAAGCTG
CTCGGGATGGAGCAGCGCCTCCACGAGCGGGTGGTCGGGCAGGAGGAGGCGGTGAGCGCCGTCTCCGCGGCGGTGCGCCG
GGCCCGCTCCGGGCTGCAGGATCCGAACCGCCCCATCGGCTCGTTCATCTTCCTCGGCCCGACCGGCGTGGGGAAGACCG
AGACCGCCCGCGCGCTCGCGCAGTTCCTGTTCGACGACGAGCGGGCCATGGTCCGGCTCGACATGTCCGAGTACATGGAG
AAGCACACCGTCTCGCGGCTCATCGGCGCGCCCCCGGGCTACGTCGGCTACGAGGAGGGCGGGCAGCTCACCGAGGCGGT
GCGGCGGCGGCCGTACGCGGTGGTGCTCTTCGACGAGATCGAGAAGGCGCACCACGACGTGTTCAACGTGCTGCTCCAGA
TCCTCGACGACGGCCGGCTCACCGACGGCCAGGGCCGCACGGTGGACTTCCGCAACACGGTCATCATCATGACCTCCAAC
ATCGGCTCGGCCGACATCCAGCGCCTCGCCGGCCGCCCCGGCGCGGACATGCAGCAGATCCGCGAGGCGGCGCTCGAGCA
CCTGCGGGGCGAGTTCCGCCCCGAGTTCCTGAACCGGGTGGACGAGATCGTGGTGTTCCGGCCGCTCGGCCGCGAGGACG
TGGGCCGGATCGTGGAGATCCAGCTCGCCCGGCTGCGCAAGCTCATCGAGGAGCGCCACGTCACCCTCGAGCTCACCGAG
GCGGCGCGCGAGGCCATCGCCGACGCCGGGTACGATCCGGTCTACGGCGCGCGCCCGCTGAAGCGCGCCATCCAGCGGAT
GGTGCAGGACCCGCTCGCGACCCGCCTGCTCCAGGGCGAGTTCAAGGCCGGCGACCACGTGGTCGTGGACGAGGGCAAGG
ACGGCAACATCGTCTTCCGCAAGGGCGAGCGGCCGGAGGTCACCGTCCACTGA

Protein sequence :
MRMEKLTVKAQEVLAAAQGEARRRDHQAVDVEHLVLALLAQEEGIARPVLEKIGADPRLVASRVEDELRSLPKVSGAEPY
PANRLLKLFDRAEDGARKLKDEYVSTEHLLLAAAEDKGGAGDALRASGATPDRVRQAVQEVRGGARVTSPEAESQYRALE
KYAKDLTDLARKGKLDPVIGRDDEIRRVVQILSRRTKNNPVLVGDPGVGKTAIVEGLARRIVDGDVPEGLKNKRLLALDL
GALLAGAKFRGEFEERLKAVLKEVTGSEGQIILFIDEMHTIVGAGAAEGAMDAGNMLKPALARGELHAVGATTVNEYRKH
IEKDPALERRFQPVFVGEPSLTDTISILRGLKDRYELHHKVRIQDAALVEAARLSSRYITDRFLPDKAIDLVDEAASRLR
IEIDSMPTEVDEVRRRIGQLEIERQGLRKEQDEASRARLAAVEKELAARNEEFTALKGRWDAEKAVIQELSQARQELETL
KVEQAAAERQADFQKAAEIKFGRLPELTRRVKAAEEKLAEAQTRGAMLKEEVTPEEIGEVVSKWTGIPVSRLMEGEVEKL
LGMEQRLHERVVGQEEAVSAVSAAVRRARSGLQDPNRPIGSFIFLGPTGVGKTETARALAQFLFDDERAMVRLDMSEYME
KHTVSRLIGAPPGYVGYEEGGQLTEAVRRRPYAVVLFDEIEKAHHDVFNVLLQILDDGRLTDGQGRTVDFRNTVIIMTSN
IGSADIQRLAGRPGADMQQIREAALEHLRGEFRPEFLNRVDEIVVFRPLGREDVGRIVEIQLARLRKLIEERHVTLELTE
AAREAIADAGYDPVYGARPLKRAIQRMVQDPLATRLLQGEFKAGDHVVVDEGKDGNIVFRKGERPEVTVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-103 45
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-97 41
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 3e-97 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AnaeK_0413 YP_002132784.1 ATP-dependent chaperone ClpB VFG2076 Protein 1e-120 44
AnaeK_0413 YP_002132784.1 ATP-dependent chaperone ClpB VFG2084 Protein 1e-100 43