Gene Information

Name : PHZ_c0928 (PHZ_c0928)
Accession : YP_002129771.1
Strain : Phenylobacterium zucineum HLK1
Genome accession: NC_011144
Putative virulence/resistance : Virulence
Product : ATP-binding ABC transporter protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 1019357 - 1020124 bp
Length : 768 bp
Strand : +
Note : -

DNA sequence : 
ATGGACCCCGCCATCGAGCTCCAGTCCGTCGCCAAGCGGTACGGTCCCAGCCCGGCGCTGGACGCGGTCAGCCTCTCGGT
GGCCGAGGGCGAGTTCGTGGCGCTCGTCGGCGGATCGGGGTCGGGCAAGACGACCCTCCTCAAGACCATCAACGGTCTGG
TGCGGCCCGACGGCGGGACCGTCCGGGTGCTCGGCCAGGACGTGGCCGCCGCGCCCGAGCCGCACCTGCTGCGGCGGCGG
ATCGGCTATGTCTTCCAGGAGGTGGGCCTGTTCCCCCACCGGACCGTGGGCGAGAACATCGCCGTCGTGCCGGCCCTCCT
GGGCTGGCGGGCCCCGGCCATCGCCGCACGCGTGGCGGAGCTGCTCGAGCTGACGGATCTGCCGGCCGAGGTCCGTGACC
GCCTGCCGGCCGAGCTCTCCGGCGGGCAGCGCCAGCGGGTCGGCGTGGCCCGCGCCCTGGCGGCCGAGCCGTCGCTGATG
CTGATGGACGAGCCGTTCGGCGCCCTCGATCCGCTGACCCGCGACGCCCTGGGGACCGACTACCGCCGGCTGCACGAGCG
GCTGGGCCTGACCACGGTGATGGTCACCCACGACATGGCCGAGGCGGTGCTGCTCGCCGACCGCGTCGTGGTGATGAGGG
CGGGCCGCATCCTGGCGGACGGCCGCCCCGCGGACCTCTTGGCCCGGACCGAGGATCCCGACGTGCGCGCGCTGCTGGAG
GCCCCGCGGCGCCAGGCCGAGCGGCTGGCGCAGAGGTTCGGCGCATGA

Protein sequence : 
MDPAIELQSVAKRYGPSPALDAVSLSVAEGEFVALVGGSGSGKTTLLKTINGLVRPDGGTVRVLGQDVAAAPEPHLLRRR
IGYVFQEVGLFPHRTVGENIAVVPALLGWRAPAIAARVAELLELTDLPAEVRDRLPAELSGGQRQRVGVARALAAEPSLM
LMDEPFGALDPLTRDALGTDYRRLHERLGLTTVMVTHDMAEAVLLADRVVVMRAGRILADGRPADLLARTEDPDVRALLE
APRRQAERLAQRFGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-44 49
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-43 48
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-27 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PHZ_c0928 YP_002129771.1 ATP-binding ABC transporter protein NC_008702.1.4606598. Protein 2e-20 43
PHZ_c0928 YP_002129771.1 ATP-binding ABC transporter protein BAC0600 Protein 1e-28 42
PHZ_c0928 YP_002129771.1 ATP-binding ABC transporter protein CP001581.1.gene798.p Protein 8e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PHZ_c0928 YP_002129771.1 ATP-binding ABC transporter protein VFG2059 Protein 2e-11 41