|
Name : fliI (PHZ_c0853) Accession : YP_002129696.1 Strain : Phenylobacterium zucineum HLK1 Genome accession: NC_011144 Putative virulence/resistance : Virulence Product : flagellum-specific ATP synthase Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : - Position : 945008 - 946357 bp Length : 1350 bp Strand : + Note : involved in type III protein export during flagellum assembly DNA sequence : GTGCAGAGTCTTGTCGCCGCCGTGGAGCGGCTCGATCCCCTGACCGTGTCCGGGCGCGTGGCGGCCGTGAACGGCCTCCT GATCGAGGCCCGCGGGGGGCTGACCCGCCTGGCCGTCGGCGCCCGGGCCGAGATCGCCCGCTTCGGACACGATCCGCTGG CCGCCGAGGTGGTGGGCTTCCGCGACACCCGCGCGCTGCTGATGCCCTTCGGTCCGGTGGAGGGCGTCGCCCCCGGCGCC GAGATCCGCATCGAGCCCCAGGGCTCGGCCGTGCGCCCGACGCGCGCCTGGCTGGGCCGCACCGTCGACGCCTTCGGCAA TCCCATCGACGGCAAGGGGCCGCTGCCGCAGGGACTGGCCAGCTATCCGCTGCGCGCCCCCCCGCCGGCCGCGCACGCCC GCGCCCGGGTGGGCGAGCGGCTGGACCTGGGCGTGCGGGCCATGAACGTCTTCACCACCTGCTGCCGGGGCCAGCGCCTG GGCGTCTTCGCCGGCTCGGGCGTCGGCAAGTCGGTGCTGCTCTCGATGCTGGCCAAGAACGCCGACTGCGACGCCGTCGT GGTCGGCCTGATCGGCGAGCGGGGGCGCGAGGTGCGGGAGTTCATCGAGGAGACCCTGGGCGAGGAAGGTCTGAAACGCG CCATCGTCGTGGTCGCCACGTCGGACGAGCCGGCGCTCAAGCGCCGCCAGGCCGCCTACATGACCATGGCCATCGCCGAG TTCCTGCGCGACCAGGATCTGGAGGTCCTGTGCCTCATGGACAGCGTCACCCGCTTCGCCATGGCCCAGCGCGAGATCGG CCTGGCCGCCGGCGAGCCGCCGACCACCAAGGGCTACACCCCCACCGTCTTCACCGAGCTGCCCAAGCTGCTGGAGCGCG CCGGCCCCGGGCCCATCCGGCCCGACGGGACGCGGGCGGGGCCGATCACCGGCCTCTTCACCGTGCTGGTGGACGGCGAC GACCACAACGAGCCGATCGCCGATGCGGTGCGCGGCATCCTCGACGGCCACATCGTGATGGAGCGGGCCATCGCCGAGCG CGGCCGCTTCCCGGCCATCAACGTGCTGAAATCGATCAGCCGGACCATGCCGGGCTGCCAGCAGCCGCACGAGCGCGAGG TGGTGAAACAGGCCCGCCAGGCGCTGTCGGCCTACGCCAACATGGAGGAGCTGATCCGCATCGGCGCCTACCGCGCCGGG GCCGATCCGCTGATCGACCGGGCGATCGAGCTCAACCCGTCGCTCGAAGCATTCCTCTCCCAGGACCCGGACGACGCCAC CGGGCTGGAGGAGTCCTTCGCCGGGCTCGCCATGATCCTGGGCCAGGCTGGTGAGGCGGCCGCGGCATGA Protein sequence : MQSLVAAVERLDPLTVSGRVAAVNGLLIEARGGLTRLAVGARAEIARFGHDPLAAEVVGFRDTRALLMPFGPVEGVAPGA EIRIEPQGSAVRPTRAWLGRTVDAFGNPIDGKGPLPQGLASYPLRAPPPAAHARARVGERLDLGVRAMNVFTTCCRGQRL GVFAGSGVGKSVLLSMLAKNADCDAVVVGLIGERGREVREFIEETLGEEGLKRAIVVVATSDEPALKRRQAAYMTMAIAE FLRDQDLEVLCLMDSVTRFAMAQREIGLAAGEPPTTKGYTPTVFTELPKLLERAGPGPIRPDGTRAGPITGLFTVLVDGD DHNEPIADAVRGILDGHIVMERAIAERGRFPAINVLKSISRTMPGCQQPHEREVVKQARQALSAYANMEELIRIGAYRAG ADPLIDRAIELNPSLEAFLSQDPDDATGLEESFAGLAMILGQAGEAAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 4e-78 | 48 |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 4e-74 | 47 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 4e-74 | 47 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 2e-73 | 45 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-73 | 45 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 2e-73 | 45 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 4e-74 | 45 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 9e-73 | 45 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 7e-73 | 45 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-73 | 45 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 6e-69 | 44 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 6e-69 | 44 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 5e-70 | 44 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 4e-70 | 44 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 3e-70 | 44 |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 3e-67 | 43 |
| hrcN | NP_791227.1 | type III secretion cytoplasmic ATPase HrcN | Virulence | Hrp PAI | Protein | 1e-62 | 42 |
| hrcN | AAT96195.1 | HrcN | Virulence | T-PAI | Protein | 6e-63 | 42 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 6e-63 | 42 |
| hrcN | ABQ88354.1 | HrcN | Virulence | Hrp PAI | Protein | 7e-60 | 42 |
| hrpJ4 | AAA81942.1 | HrpJ4 | Virulence | Hrp PAI | Protein | 7e-60 | 42 |
| escN | AFO66300.1 | putative LEE-encoded type III secretion system ATPase | Virulence | SESS LEE | Protein | 2e-64 | 42 |
| escN | AFO66415.1 | putative LEE-encoded type III secretion system ATPase | Virulence | SESS LEE | Protein | 2e-64 | 42 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 4e-60 | 41 |
| hrcN | ABA47275.1 | HrcN | Virulence | S-PAI | Protein | 1e-70 | 41 |
| hrcN | AAT96258.1 | HrcN | Virulence | S-PAI | Protein | 6e-67 | 41 |
| hrcN | AAT96299.1 | HrcN | Virulence | S-PAI | Protein | 2e-67 | 41 |
| hrcN | AAT96339.1 | HrcN | Virulence | S-PAI | Protein | 1e-67 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliI | YP_002129696.1 | flagellum-specific ATP synthase | VFG2499 | Protein | 4e-82 | 48 |
| fliI | YP_002129696.1 | flagellum-specific ATP synthase | VFG2144 | Protein | 3e-83 | 47 |
| fliI | YP_002129696.1 | flagellum-specific ATP synthase | VFG1254 | Protein | 1e-77 | 47 |
| fliI | YP_002129696.1 | flagellum-specific ATP synthase | VFG2331 | Protein | 1e-76 | 45 |
| fliI | YP_002129696.1 | flagellum-specific ATP synthase | VFG0048 | Protein | 2e-80 | 44 |
| fliI | YP_002129696.1 | flagellum-specific ATP synthase | VFG0515 | Protein | 2e-70 | 44 |
| fliI | YP_002129696.1 | flagellum-specific ATP synthase | VFG0390 | Protein | 9e-78 | 44 |
| fliI | YP_002129696.1 | flagellum-specific ATP synthase | VFG0192 | Protein | 3e-78 | 44 |
