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Name : clpB (PHZ_c0774) Accession : YP_002129617.1 Strain : Phenylobacterium zucineum HLK1 Genome accession: NC_011144 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 852796 - 855372 bp Length : 2577 bp Strand : + Note : - DNA sequence : ATGAACATCGACATCTATTCCGACCGCGCCAAGCAGGCGATCCAGTCGGCCCAGAGCCTGGCGCTCGCCCGGCGCCACCA GCAGCTCGGCCCGGAGCACGTCCTGAAGGTGCTGCTGGAGGAGAAGGACGGCCTGTCCCGCGCGCTGATCCAGAGCGCCG GCGGCCGGCCCGACGCGGCCGACAAGGCGGTGGACGACCTCCTGGGCCGGCTTCCCAAGGTCGAGGGCGGTTCGGGCCAG CTCTACATGAAGCCCGAGACGGCCCGGGTGTTCGCCGAGGCCGAGGCGGGCGCCAAGGCCGCCGGGGACGCCTTCGTCAC CACCGAACGCCTGCTGATCGCCATCGCCAAGGAAGGCGGCGAGGCCGCCAACGCCCTCAAGCAGGCCGGCGCCAGTCCCA AGGGCCTGGAAGAGGCCGCCAGCGCCGTTCGCAAGGGGCGCACGGCGGATTCCGCCTCGGCGGAAGAAGGGTACGACGCC CTGAAGCGCTACGCCCGCGACCTGACCCAGGCCGCCCGCGACGGCAAGCTCGATCCCGTCATCGGCCGCGACGAGGAGAT CCGCCGGACCATCCAGGTCCTCTCCCGCCGCACCAAGAACAACCCCGTCCTGATCGGCGAGCCCGGCGTCGGCAAGACCG CCATCGTCGAGGGCCTGGCCCTGCGCATCGTCAACGGCGACGTGCCCGAGAGCCTGAAGGACAAGCAGCTGCACGCGCTC GACATGGGCGCGCTGATCGCCGGGGCGAAGTACCGCGGCGAGTTCGAGGAGCGGCTGAAGGCGGTGCTGAACGAGGTCAC CCAGGCCGAAGGCTCCATCATCCTGTTCATCGACGAGATGCACACCCTGGTCGGCGCCGGGAAGAGCGACGGGGCCATGG ACGCCTCGAACCTGCTGAAGCCCGCGCTGGCCCGCGGCGAACTGCACTGCGTGGGCGCCACCACGCTCGACGAGTACCGC AAGCACGTCGAGAAGGACGCGGCCCTGGCCCGCCGCTTCCAGCCGGTGTTCGTCTCCGAGCCGACGGTCGAGGACACCGT CTCGATCCTGCGCGGCCTGAAGGAGAAGTACGAGGTCCACCACGGCGTGCGGATCTCGGACAGCGCCATCGTGGCCGCCG CCACCCTCTCCAACCGCTACATCACCGACCGCTTCCTCCCCGACAAGGCCATCGACCTGGTGGACGAGGCGGCCAGCCGC GTGCGCATGGCGGTGGACTCCAAGCCCGAGGAGCTGGACGAGATCGACCGCCGCGTCGTGCAGCTGAAGATCGAGCGCGA GGCCCTCGCCAAGGAGACCGACGCGGCCTCGAAGGCGCGCCTCGAGAAGCTCGAGGAGGAGCTGGCCGGGCTCGAGGCGC AGTCCGCCGAGATGACCGCCCGCTGGCGCGCCGAGAAGGAGAAGGTCTCCTCCGCCGCCCAGGTCCGCGAGGGCCTGGAC CGGCTGCGGGCCGAACTGACCGCCGCCCAACGGCGCGGCGACCTGCAGCGCGCCTCCGAGATCGCCTACGGGGAGATCCC GCAGCTGGAGAAGCGGCTCGCCGAGGCCGAGGCCGCCGAGGGCGGCGACGAGGCCATGACGCCCGAGGTCGTCGACGCCG AGCAGATCGCCGCCGTCGTCTCGCGCTGGACCGGCGTGCCTGTCGAGAAGATGCTGGAGGGCGAGCGCGAGAAGCTGCTC CAGATGGAGGACGGCCTGCGCCGCCGGGTGGTCGGCCAGGAGGAGGCGCTGGTCGCCGTCTCCGACGCCGTGCGCCGCGC CCGCGCCGGCCTGAAGGACCCGAACCGGCCGATCGGCTCGTTCCTGTTCTTAGGACCCACCGGCGTCGGCAAGACCGAGC TGACCAAGGCGCTGGCCGAGTTCCTGTTCGACGACGAGTCCGCCGTGACCCGCCTCGACATGAGCGAGTACATGGAGAAG CACTCGGTCAGCCGGATGATCGGCGCGCCTCCCGGCTACGTCGGCTACGACGAGGGCGGGGCGCTGACCGAGAGCGTCCG CCGGCGGCCCTACCAGGTCGTGCTGTTCGACGAGGTCGAGAAGGCCCACCCCGACGTCTTCAACGTGCTGCTGCAGGTGC TGGACGACGGCCGCCTGACCGACGGCCAGGGCCGCACGGTCGACTTCCGCAATACGCTGATCATCATGACGTCCAACCTC GGCTCGGAATTCCTGGCCGGCGGCGACGACGTGGAGACGGCGCGTCCGGCGGTCATGGAGGTCGTGCGCCGCCACTTCCG GCCCGAGTTCCTGAACCGGATCGACGAGGTGATCCTCTTCAAGCGCCTGGGCCGGGCCGAGATGGACGACATCGTCCGCA TCCAGCTCCAGCGCGTCGAGAAGCTGCTGGCCGACCGGCGCATGGCGCTGGCGCTGGATCCCGCCGCCCTGCACTGGCTG GGCGACCGGGGCTACGACCCGGTCTACGGGGCGCGGCCGCTGAAGCGGGTGATCCAGAAGGAGCTGGTGGACCCCATCGC CCGCAAGCTGCTGGCGGGCGAGCTGGAGGACGGCTCGGTCATCGACGTCACCGCCGGCGACGCCGGCCTCGAGATCGGCC GGGCCAAGGTGCACTGA Protein sequence : MNIDIYSDRAKQAIQSAQSLALARRHQQLGPEHVLKVLLEEKDGLSRALIQSAGGRPDAADKAVDDLLGRLPKVEGGSGQ LYMKPETARVFAEAEAGAKAAGDAFVTTERLLIAIAKEGGEAANALKQAGASPKGLEEAASAVRKGRTADSASAEEGYDA LKRYARDLTQAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDKQLHAL DMGALIAGAKYRGEFEERLKAVLNEVTQAEGSIILFIDEMHTLVGAGKSDGAMDASNLLKPALARGELHCVGATTLDEYR KHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKEKYEVHHGVRISDSAIVAAATLSNRYITDRFLPDKAIDLVDEAASR VRMAVDSKPEELDEIDRRVVQLKIEREALAKETDAASKARLEKLEEELAGLEAQSAEMTARWRAEKEKVSSAAQVREGLD RLRAELTAAQRRGDLQRASEIAYGEIPQLEKRLAEAEAAEGGDEAMTPEVVDAEQIAAVVSRWTGVPVEKMLEGEREKLL QMEDGLRRRVVGQEEALVAVSDAVRRARAGLKDPNRPIGSFLFLGPTGVGKTELTKALAEFLFDDESAVTRLDMSEYMEK HSVSRMIGAPPGYVGYDEGGALTESVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNL GSEFLAGGDDVETARPAVMEVVRRHFRPEFLNRIDEVILFKRLGRAEMDDIVRIQLQRVEKLLADRRMALALDPAALHWL GDRGYDPVYGARPLKRVIQKELVDPIARKLLAGELEDGSVIDVTAGDAGLEIGRAKVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-100 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_002129617.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG2076 | Protein | 6e-115 | 45 |
| clpB | YP_002129617.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG2084 | Protein | 5e-108 | 43 |
