Gene Information

Name : pyk (PHZ_c3254)
Accession : YP_002132092.1
Strain : Phenylobacterium zucineum HLK1
Genome accession: NC_011144
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 3687562 - 3688974 bp
Length : 1413 bp
Strand : -
Note : -

DNA sequence :
ATGATCCGAGCCCGCCGCGCGCGCATCGTCGCGACCCTTGGCCCCGCCAGCCGCGACCTCGACAAGGTGCGCGAGCTCGC
CCTGGCCGGCGCCGACGTGTTCCGGGTGAACTTCAGCCACGGGACCCACGCCGACCATGCGCGCACGATCCAAAACGTGC
GCAAGGCCGAGCAGGCGGTCGGTCGCCCCATCGCCGTCCTCGCCGACCTGCAGGGGCCCAAGCTGCGCCTCGGCCGGTTC
GCCGAGCGTTCGGCGCCGCTGAAGGCGGGCCAGCGCTTCCGCATCGACATGGACAAGACGCCGGGGGACTCGGAGCGGGT
CGGCGTGCCCCACCCCGAGGTGTTCGCCGCCATCCGCGAGGGGGCCGTGGTCCTGCTGGACGACGGCAAGGTCCGGCTGC
GGGTGGTCAAGCACGGCCCCGACTGGGCCGACACCGTCGTCGAGGCCGGCGAGCAGCTCTCGGACCACAAGGGGCTGAAC
CTGCCGGGCTCGGCCATCCCCATTCCCGCGCTCACCGAGAAGGACCGCAAGGACCTGGCGTTCGCCCTGCAGGAGGGCGT
CGACTGGGTGGCGCTGTCGTTCGTCCAGCGGGCGTCCGACATGGCGGAGCTGCGCCAGATCGTGGCCGGCCGGGCCGGGG
TTCTTGCCAAGATCGAGAAGCCGGCCGCCCTCAACGCGCTCGACGAGATCCTCGACCTCTCCGAGGCGGTGATGGTCGCC
CGCGGAGATCTCGGCGTCGAGCTCGCGCCCGAGGAGGTGCCGGTCGCCCAGAAGCAGCTCATCCGCGCCGCCCGGATGCG
CGGCATCCCGGTGATCGTGGCCACCCAGATGCTGGAGTCGATGATCCACTCGCCGACCCCGACCCGCGCCGAGGCCTCGG
ACGTGGCCGGCGCGGTCTACGAGGGCGCCGACGCGGTGATGCTCTCGGCCGAGACGGCGGCGGGCGACTATCCGCTCGAG
GCGGTCTCGATCATGGACCGCATCATCACCCGGGTGGAGCAGGACCCGCGCTGGTCCGAGCTGATGCGCGCCCAGCACGA
GGTGGGCGACGCCGACGCCCTCGTCTCGGCCGCCTTCCACGCCGCCGAGACGGCCTCGGCCGCCTGCGTGGCCGCCTTCA
CCCTCACCGGCCAGACGGCGCTGCGGCTCGGGCGCGAGCGGCCGGTGCAGCCGACGCTGGCGCTGACACCCCGGCTCGCC
ACCGCCCGCCGGCTCGCCCTGGCGTGGGGCGTCGAGGCGCGCGTGGTGGCCGACATCCGCGACCCCGAGGACATCCCCAA
GCTCGCCTGCCACGAGGCCATGGCCGCGGGCTTGGCCGGCCCCGCCCAGCGGATCCTGATCCTGGCCGGCCTGCCGATGG
GCGCGCCGGGCGCGGCCAATATCCTGCGGCTGGCGCACACCCCTCGGCGCTAG

Protein sequence :
MIRARRARIVATLGPASRDLDKVRELALAGADVFRVNFSHGTHADHARTIQNVRKAEQAVGRPIAVLADLQGPKLRLGRF
AERSAPLKAGQRFRIDMDKTPGDSERVGVPHPEVFAAIREGAVVLLDDGKVRLRVVKHGPDWADTVVEAGEQLSDHKGLN
LPGSAIPIPALTEKDRKDLAFALQEGVDWVALSFVQRASDMAELRQIVAGRAGVLAKIEKPAALNALDEILDLSEAVMVA
RGDLGVELAPEEVPVAQKQLIRAARMRGIPVIVATQMLESMIHSPTPTRAEASDVAGAVYEGADAVMLSAETAAGDYPLE
AVSIMDRIITRVEQDPRWSELMRAQHEVGDADALVSAAFHAAETASAACVAAFTLTGQTALRLGRERPVQPTLALTPRLA
TARRLALAWGVEARVVADIRDPEDIPKLACHEAMAAGLAGPAQRILILAGLPMGAPGAANILRLAHTPRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-61 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-61 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-61 44
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-61 44
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 4e-48 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_002132092.1 pyruvate kinase VFG0479 Protein 8e-62 44